RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ADH1AP07327 375 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 CYP2F1P24903 491 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 CDH5P33151 784 aaPredicted RBP22.55■■□□□ 1.2
CBWD3-202ENST00000377342 NOMO3P69849 1222 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 SMARCB1Q12824 385 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 BMS1Q14692 1282 aaKnown RBP22.55■■□□□ 1.2
CBWD3-202ENST00000377342 TPGS2Q68CL5 300 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 CLEC20AQ6ZU45 233 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 WDTC1Q8N5D0 677 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 ANKRD52Q8NB46 1076 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 ZMIZ2Q8NF64 920 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 MRPL38Q96DV4 380 aaKnown RBP22.55■■□□□ 1.2
CBWD3-202ENST00000377342 SMOQ99835 787 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 ABCB6Q9NP58 842 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 A0A087X0T9 212 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 FAM170AA1A519 330 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 TULP2O00295 520 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 FAM228BP0C875 321 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 NPR3P17342 541 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 GPD2P43304 727 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 KIF11P52732 1056 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 BCAT1P54687 386 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 ADCY1Q08828 1119 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 RAD9BQ6WBX8 426 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 TMTC1Q8IUR5 882 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 C1orf131Q8NDD1 294 aaKnown RBP22.55■■□□□ 1.2
CBWD3-202ENST00000377342 SPPL2BQ8TCT7 592 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 C2orf15Q8WU43 125 aaKnown RBP22.55■■□□□ 1.2
CBWD3-202ENST00000377342 SECISBP2LQ93073 1101 aaKnown RBP22.55■■□□□ 1.2
CBWD3-202ENST00000377342 DUSP16Q9BY84 665 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 LHX5Q9H2C1 402 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 PRDM12Q9H4Q4 367 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 ADAMTS1Q9UHI8 967 aa22.55■■□□□ 1.2
CBWD3-202ENST00000377342 MYO16Q9Y6X6 1858 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 TGM5O43548 720 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 AP1G2O75843 785 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 SEC24AO95486 1093 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 FAM200BP0CF97 657 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 UNGP13051 313 aaPredicted RBP22.54■■□□□ 1.2
CBWD3-202ENST00000377342 ATF2P15336 505 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 ANXA13P27216 316 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 PDE4CQ08493 712 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 BST2Q10589 180 aaKnown RBP22.54■■□□□ 1.2
CBWD3-202ENST00000377342 GRIN2CQ14957 1233 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 LILRA6Q6PI73 481 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 CSNK1G1Q9HCP0 422 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 SEPT11Q9NVA2 429 aaKnown RBP22.54■■□□□ 1.2
CBWD3-202ENST00000377342 TAS2R14Q9NYV8 317 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 HESX1Q9UBX0 185 aa22.54■■□□□ 1.2
CBWD3-202ENST00000377342 ZNF638Q14966 1978 aaKnown RBP22.54■■□□□ 1.2
CBWD3-202ENST00000377342 ZNF263O14978 683 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 CLASP2O75122 1294 aaKnown RBP22.53■■□□□ 1.2
CBWD3-202ENST00000377342 LSM8O95777 96 aaKnown RBP22.53■■□□□ 1.2
CBWD3-202ENST00000377342 TNFAIP3P21580 790 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 MAGEA11P43364 429 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 CLCN4P51793 760 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 GFPT1Q06210 699 aaPredicted RBP22.53■■□□□ 1.2
CBWD3-202ENST00000377342 DUSP4Q13115 394 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 CLEC16AQ2KHT3 1053 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 TRIM72Q6ZMU5 477 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 CCDC112Q8NEF3 446 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 KCNK16Q96T55 309 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 SPTLC3Q9NUV7 552 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 FBXW11Q9UKB1 542 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 SLC27A5Q9Y2P5 690 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 ATP8B3O60423 1300 aa22.53■■□□□ 1.2
CBWD3-202ENST00000377342 SOAT2O75908 522 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 SETSIPP0DME0 302 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 KLRC2P26717 231 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 GPR15P49685 360 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 MAP3K7CLP57077 242 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 SLC18A3Q16572 532 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 NAA35Q5VZE5 725 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 SLC35F5Q8WV83 523 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 CCDC42Q96M95 316 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 PDCL3Q9H2J4 239 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 DMAP1Q9NPF5 467 aaPredicted RBP22.52■■□□□ 1.2
CBWD3-202ENST00000377342 PER2O15055 1255 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 HAPLN1P10915 354 aaPredicted RBP22.52■■□□□ 1.2
CBWD3-202ENST00000377342 CENPCQ03188 943 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 PTPROQ16827 1216 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 VSTM1Q6UX27 236 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 DNAAF5Q86Y56 855 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 ZNF830Q96NB3 372 aaPredicted RBP22.52■■□□□ 1.2
CBWD3-202ENST00000377342 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.52■■□□□ 1.2
CBWD3-202ENST00000377342 DEF6Q9H4E7 631 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 HSFX1Q9UBD0 423 aa22.52■■□□□ 1.2
CBWD3-202ENST00000377342 HHLA1C9JL84 531 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 F8VP50 259 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 XPO1O14980 1071 aaKnown RBP22.51■■□□□ 1.19
CBWD3-202ENST00000377342 GABBR2O75899 941 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 GLUD1P00367 558 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 SPATA31D3P0C874 917 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 ATF6P18850 670 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 PLA2G4AP47712 749 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 PDCLQ13371 301 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 ZNF697Q5TEC3 545 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 PMF1Q6P1K2 205 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 SPATA31D4Q6ZUB0 917 aa22.51■■□□□ 1.19
CBWD3-202ENST00000377342 VPS36Q86VN1 386 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms