RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 EFCAB12Q6NXP0 572 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 LBX2Q6XYB7 198 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 SPATA18Q8TC71 538 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 PAFAH2Q99487 392 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 RPF1Q9H9Y2 349 aaKnown RBP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 PSMC3IPQ9P2W1 217 aaPredicted RBP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 KAT6AQ92794 2004 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 CFAP73A6NFT4 308 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 ITGAVP06756 1048 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 KDELR1P24390 212 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 MIPP30301 263 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 SLC8A1P32418 973 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 RGS7P49802 495 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 SLC25A11Q02978 314 aaKnown RBP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 GALNTL6Q49A17 601 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 MPZL3Q6UWV2 235 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 KCNV2Q8TDN2 545 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 PIWIL1Q96J94 861 aaKnown RBP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 NCAPGQ9BPX3 1015 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 GPATCH2LQ9NWQ4 482 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 PRKAG3Q9UGI9 489 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 EIF4E1BA6NMX2 242 aaKnown RBP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 ALOX15BO15296 676 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 CBX6O95503 412 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 ABHD2P08910 425 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 CDC25CP30307 473 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 ARL4CP56559 192 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 MOB2Q70IA6 237 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 SLC35B2Q8TB61 432 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 LRRC37BQ96QE4 947 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 ELP3Q9H9T3 547 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 PDGFCQ9NRA1 345 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM27-202ENST00000377199 HEY1Q9Y5J3 304 aa17.04■□□□□ 0.32
TRIM27-202ENST00000377199 RLFQ13129 1914 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 C3orf70A6NLC5 250 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 RNF8O76064 485 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 MSH2P43246 934 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 BAG6P46379 1132 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 CDH6P55285 790 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 GEMIN4P57678 1058 aaKnown RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 YWHAEP62258 255 aaKnown RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 DARS2Q6PI48 645 aaKnown RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 GBP7Q8N8V2 638 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 C1orf127Q8N9H9 656 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 PPP1R13LQ8WUF5 828 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 SLC17A7Q9P2U7 560 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 F5H423 210 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 RAD23BP54727 409 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 YWHAGP61981 247 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 MKRN3Q13064 507 aaKnown RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 LRRC38Q5VT99 294 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 JADE1Q6IE81 842 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 PPIL6Q8IXY8 311 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 NKD2Q969F2 451 aaPredicted RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 GPR20Q99678 358 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 ADPGKQ9BRR6 497 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 WDR83Q9BRX9 315 aaKnown RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 CDT1Q9H211 546 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 SIX4Q9UIU6 781 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 STRIP2Q9ULQ0 834 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 SHOC2Q9UQ13 582 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 CHKBQ9Y259 395 aa17.03■□□□□ 0.32
TRIM27-202ENST00000377199 DRG1Q9Y295 367 aaKnown RBP17.03■□□□□ 0.32
TRIM27-202ENST00000377199 LACTBL1A8MY62 500 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 ZBTB42B2RXF5 422 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 GPR25O00155 361 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 IRF6O14896 467 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 USP2O75604 605 aaPredicted RBP17.02■□□□□ 0.32
TRIM27-202ENST00000377199 KRT7P08729 469 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 MXD4Q14582 209 aaPredicted RBP17.02■□□□□ 0.32
TRIM27-202ENST00000377199 SMAD1Q15797 465 aaKnown RBP17.02■□□□□ 0.32
TRIM27-202ENST00000377199 OR6B2Q6IFH4 312 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 RELL1Q8IUW5 271 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 C12orf29Q8N999 325 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 TCP10LQ8TDR4 215 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 UBN1Q9NPG3 1134 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 USP18Q9UMW8 372 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 SNCAIPQ9Y6H5 919 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 DOCK1Q14185 1865 aa17.02■□□□□ 0.32
TRIM27-202ENST00000377199 SIGLEC16A6NMB1 481 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 H7C0C1 242 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 MICAL2O94851 1124 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 ANP32DO95626 131 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 ATP5OP48047 213 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 AP3M2P53677 418 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 AEBP2Q6ZN18 517 aaPredicted RBP17.02■□□□□ 0.31
TRIM27-202ENST00000377199 XYLT1Q86Y38 959 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 IGDCC3Q8IVU1 814 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 RIBC1Q8N443 379 aaPredicted RBP17.02■□□□□ 0.31
TRIM27-202ENST00000377199 ZNF518BQ9C0D4 1074 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 ELOVL4Q9GZR5 314 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 ACTL7BQ9Y614 415 aa17.02■□□□□ 0.31
TRIM27-202ENST00000377199 A0A0G2JND7 137 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 ABLIM1O14639 778 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 MCF2LO15068 1137 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 VTNP04004 478 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms