RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 TCHPQ9BT92 498 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 FETUBQ9UGM5 382 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 PCSK1NQ9UHG2 260 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 ADCY3O60266 1144 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 ATG7O95352 703 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 TROVE2P10155 538 aaKnown RBP eCLIP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 KRT3P12035 628 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 EIF4BP23588 611 aaKnown RBP13.86□□□□□ -0.19
ACTN1-202ENST00000376839 KDELR1P24390 212 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 ORC1Q13415 861 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 KLHL38Q2WGJ6 581 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 PALM2Q8IXS6 379 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 SPDL1Q96EA4 605 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 ZNF518BQ9C0D4 1074 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 MANSC1Q9H8J5 431 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 ARL8BQ9NVJ2 186 aa13.86□□□□□ -0.19
ACTN1-202ENST00000376839 ASPAP45381 313 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 RAP1GAPP47736 663 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 RASSF2P50749 326 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
ACTN1-202ENST00000376839 BLMHQ13867 455 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 NBPF12Q5TAG4 269 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-202ENST00000376839 ENDOVQ8N8Q3 282 aaKnown RBP13.85□□□□□ -0.19
ACTN1-202ENST00000376839 SERAC1Q96JX3 654 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 PCYT2Q99447 389 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 TMEM134Q9H6X4 195 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 TLE6Q9H808 572 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 SLC24A3Q9HC58 644 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 LNPEPQ9UIQ6 1025 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 POLIQ9UNA4 740 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 C2orf71A6NGG8 1288 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 NDC80O14777 642 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 CD19P15391 556 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 TFAMQ00059 246 aaKnown RBP13.85□□□□□ -0.19
ACTN1-202ENST00000376839 ZC3H12AQ5D1E8 599 aaKnown RBP13.85□□□□□ -0.19
ACTN1-202ENST00000376839 SPDYAQ5MJ70 313 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 WASHC2DQ5SRD0 308 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 CADM1Q9BY67 442 aaKnown RBP13.85□□□□□ -0.19
ACTN1-202ENST00000376839 FBXO6Q9NRD1 293 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-202ENST00000376839 HEY2Q9UBP5 337 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 LRRC42Q9Y546 428 aa13.85□□□□□ -0.19
ACTN1-202ENST00000376839 CFAP69A5D8W1 941 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 SIGLEC16A6NMB1 481 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 TM9SF1O15321 606 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 UPP2O95045 317 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PSEN1P49768 467 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PSMC1P62191 440 aaKnown RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 TAZQ16635 292 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 ZNF699Q32M78 642 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 RFX6Q8HWS3 928 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 ZNF398Q8TD17 642 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 CPXM1Q96SM3 734 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PDGFDQ9GZP0 370 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 VPS11Q9H270 941 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 ACAD9Q9H845 621 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 METTL5Q9NRN9 209 aaKnown RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 NXF1Q9UBU9 619 aaKnown RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 MSCO60682 206 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 LPXNO60711 386 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 KRT7P08729 469 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 MARK3P27448 753 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 ELK3P41970 407 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PTDSS1P48651 473 aaKnown RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 EIF3EP60228 445 aaKnown RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 CNTN2Q02246 1040 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 TRPC3Q13507 836 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 DUOXA2Q1HG44 320 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 SGSM1Q2NKQ1 1148 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 NPNTQ6UXI9 565 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 DSTYKQ6XUX3 929 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PDIK1LQ8N165 341 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 HSPH1Q92598 858 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 FAM111AQ96PZ2 611 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 TSSK1BQ9BXA7 367 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 NIFKQ9BYG3 293 aaKnown RBP13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PHACTR1Q9C0D0 580 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 KCNK13Q9HB14 408 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 EFR3BQ9Y2G0 817 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 PHIPQ8WWQ0 1821 aa13.84□□□□□ -0.19
ACTN1-202ENST00000376839 LCTP09848 1927 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 TCRBV9S1A1TA0A576 114 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 PEX10O60683 326 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 MT-ND3P03897 115 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 SERPINB3P29508 390 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 ETV4P43268 484 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 FAAP100Q0VG06 881 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 PTK7Q13308 1070 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 KHDC1Q4VXA5 237 aaKnown RBP13.83□□□□□ -0.19
ACTN1-202ENST00000376839 CIAPIN1Q6FI81 312 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 CAPRIN2Q6IMN6 1127 aaKnown RBP13.83□□□□□ -0.19
ACTN1-202ENST00000376839 ZPBP2Q6X784 338 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 TTC13Q8NBP0 860 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 ZNF280CQ8ND82 737 aa13.83□□□□□ -0.19
ACTN1-202ENST00000376839 PTCD3Q96EY7 689 aaKnown RBP13.83□□□□□ -0.19
ACTN1-202ENST00000376839 LBHD1Q9BQE6 289 aaPredicted RBP13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms