RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TMEM209Q96SK2 561 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 SLC9A7Q96T83 725 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 VN1R3Q9BXE9 311 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 B3GNT5Q9BYG0 378 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 TJP2Q9UDY2 1190 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 CHORDC1Q9UHD1 332 aaPredicted RBP11.06□□□□□ -0.64
PDPN-203ENST00000376061 DNAI1Q9UI46 699 aa11.06□□□□□ -0.64
PDPN-203ENST00000376061 TCRBV5S1A1TA0A578 114 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 TUBB4AP04350 444 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 ERBB2P04626 1255 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 NOP2P46087 812 aaKnown RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 NAP1L1P55209 391 aaKnown RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 TSPY1Q01534 308 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 PLCB3Q01970 1234 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 BST2Q10589 180 aaKnown RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 IFI16Q16666 785 aaKnown RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 RTP2Q5QGT7 225 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 DNTTIP2Q5QJE6 756 aaKnown RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 SPOUT1Q5T280 376 aaKnown RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 CYP4A22Q5TCH4 519 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 LIN9Q5TKA1 542 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 PLEKHA7Q6IQ23 1121 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 FAM171BQ6P995 826 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 PHLDB2Q86SQ0 1253 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 HERC6Q8IVU3 1022 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 THEM5Q8N1Q8 247 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 LRRC57Q8N9N7 239 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 MSANTD4Q8NCY6 345 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 TRIM58Q8NG06 486 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 TPCN2Q8NHX9 752 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 ZNF564Q8TBZ8 553 aaPredicted RBP11.05□□□□□ -0.64
PDPN-203ENST00000376061 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 IGSF21Q96ID5 467 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 MED10Q9BTT4 135 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 NUP85Q9BW27 656 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 ZCWPW1Q9H0M4 648 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 KRT82Q9NSB4 513 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 TMLHEQ9NVH6 421 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 CTTNBP2NLQ9P2B4 639 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 UVRAGQ9P2Y5 699 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 SLC4A7Q9Y6M7 1214 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 MYO16Q9Y6X6 1858 aa11.05□□□□□ -0.64
PDPN-203ENST00000376061 BUB1BO60566 1050 aaPredicted RBP11.04□□□□□ -0.64
PDPN-203ENST00000376061 PALMO75781 387 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 LINC00271P0C7V0 271 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 FAM200BP0CF97 657 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 NPR3P17342 541 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 GABRB2P47870 512 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 RGS7P49802 495 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 CDR1P51861 262 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 CACNA2D1P54289 1103 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 GSCP56915 257 aaPredicted RBP11.04□□□□□ -0.64
PDPN-203ENST00000376061 MRPL58Q14197 206 aaKnown RBP11.04□□□□□ -0.64
PDPN-203ENST00000376061 RASIP1Q5U651 963 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 CLEC20AQ6ZU45 233 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 TAS1R1Q7RTX1 841 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 LRRTM3Q86VH5 581 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 CEP57Q86XR8 500 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 XYLT1Q86Y38 959 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 C3orf20Q8ND61 904 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 IPO4Q8TEX9 1081 aaKnown RBP11.04□□□□□ -0.64
PDPN-203ENST00000376061 STK32AQ8WU08 396 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 SLC35F5Q8WV83 523 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 SLC4A5Q9BY07 1137 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 DUSP16Q9BY84 665 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 RHOBTB2Q9BYZ6 727 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 GOLPH3Q9H4A6 298 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 SYNCQ9H7C4 482 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 STRIP2Q9ULQ0 834 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 SCINQ9Y6U3 715 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 LAMA2P24043 3122 aaKnown RBP11.04□□□□□ -0.64
PDPN-203ENST00000376061 CEP290O15078 2479 aa11.04□□□□□ -0.64
PDPN-203ENST00000376061 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 OR6C75A6NL08 312 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 E5RJQ4 531 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 GJB6O95452 261 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 FTCDO95954 541 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 OR4Q2P0C623 313 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 ATP2A2P16615 1042 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 CASQ1P31415 396 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PLA2G4AP47712 749 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PLXNA3P51805 1871 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 MAMLD1Q13495 774 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 MAPRE1Q15691 268 aaKnown RBP11.03□□□□□ -0.64
PDPN-203ENST00000376061 CTXN3Q4LDR2 81 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 C11orf63Q6NUN7 778 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PMF1Q6P1K2 205 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 DNAJC24Q6P3W2 148 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 SLFN11Q7Z7L1 901 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 KIF18AQ8NI77 898 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 PHOSPHO2Q8TCD6 241 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 C18orf8Q96DM3 657 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 SMARCD1Q96GM5 515 aa11.03□□□□□ -0.64
PDPN-203ENST00000376061 TMEM169Q96HH4 297 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms