RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 CD101Q93033 1021 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 HPDLQ96IR7 371 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 ZC3H10Q96K80 434 aaKnown RBP24.85■■□□□ 1.57
C9orf47-202ENST00000375850 CNTNAP3BQ96NU0 1288 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 CNTNAP3Q9BZ76 1288 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 CUEDC2Q9H467 287 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 PCIF1Q9H4Z3 704 aa24.85■■□□□ 1.57
C9orf47-202ENST00000375850 MAGEC2Q9UBF1 373 aaPredicted RBP24.85■■□□□ 1.57
C9orf47-202ENST00000375850 PRPF6O94906 941 aaKnown RBP24.84■■□□□ 1.57
C9orf47-202ENST00000375850 FAM163BP0C2L3 166 aa24.84■■□□□ 1.57
C9orf47-202ENST00000375850 WDR49Q8IV35 697 aa24.84■■□□□ 1.57
C9orf47-202ENST00000375850 SYT15Q9BQS2 421 aa24.84■■□□□ 1.57
C9orf47-202ENST00000375850 ARHGAP26Q9UNA1 814 aa24.84■■□□□ 1.57
C9orf47-202ENST00000375850 AXIN1O15169 862 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 PPP3CCP48454 512 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 AMPD3Q01432 767 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 STKLD1Q8NE28 680 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 RIN3Q8TB24 985 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 USP28Q96RU2 1077 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 ARRDC1-AS1Q9H2J1 176 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 GCNT4Q9P109 453 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 EBF1Q9UH73 591 aa24.83■■□□□ 1.57
C9orf47-202ENST00000375850 EIF3DO15371 548 aaKnown RBP eCLIP24.82■■□□□ 1.56
C9orf47-202ENST00000375850 NFATC1O95644 943 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 HDCP19113 662 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 WARSP23381 471 aaKnown RBP24.82■■□□□ 1.56
C9orf47-202ENST00000375850 ANXA13P27216 316 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 NASPP49321 788 aaPredicted RBP24.82■■□□□ 1.56
C9orf47-202ENST00000375850 SNRPFP62306 86 aaKnown RBP24.82■■□□□ 1.56
C9orf47-202ENST00000375850 EML3Q32P44 896 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 FAM173BQ6P4H8 233 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 C11orf74Q86VG3 221 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 FGFBP2Q9BYJ0 223 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 PANK2Q9BZ23 570 aa24.82■■□□□ 1.56
C9orf47-202ENST00000375850 A0A087X0B3 334 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 TRIM66O15016 1216 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 APBB3O95704 486 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 PXNP49023 591 aaPredicted RBP24.81■■□□□ 1.56
C9orf47-202ENST00000375850 DENND5BQ6ZUT9 1274 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 KBTBD6Q86V97 674 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 SH3RF2Q8TEC5 729 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 KBTBD7Q8WVZ9 684 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 CYP2S1Q96SQ9 504 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 FBRSL1Q9HCM7 1045 aaKnown RBP24.81■■□□□ 1.56
C9orf47-202ENST00000375850 TRPM5Q9NZQ8 1165 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 WNT6Q9Y6F9 365 aa24.81■■□□□ 1.56
C9orf47-202ENST00000375850 GDF9O60383 454 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 GRIK1P39086 918 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 ELF2Q15723 593 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 PLA2G2CQ5R387 149 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 ARL14EPQ8N8R7 260 aaPredicted RBP24.8■■□□□ 1.56
C9orf47-202ENST00000375850 OR5B17Q8NGF7 314 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 RPLP0P6Q8NHW5 317 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 MYCBPAPQ8TBZ2 947 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 MYLPFQ96A32 169 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 SLC22A12Q96S37 553 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 TTLL2Q9BWV7 592 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 VPS45Q9NRW7 570 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 KBTBD4Q9NVX7 518 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 HSPBP1Q9NZL4 362 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 MTMR6Q9Y217 621 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 DENND4CQ5VZ89 1909 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 SPTBN2O15020 2390 aa24.8■■□□□ 1.56
C9orf47-202ENST00000375850 TACC1O75410 805 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 RHOBTB1O94844 696 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 DMC1Q14565 340 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 STK38Q15208 465 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 CNNM4Q6P4Q7 775 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 CBWD2Q8IUF1 395 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 PDILTQ8N807 584 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 MMS19Q96T76 1030 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 TRIM9Q9C026 710 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 CRTAC1Q9NQ79 661 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 UBE4BO95155 1302 aa24.79■■□□□ 1.56
C9orf47-202ENST00000375850 TPRP12270 2363 aaKnown RBP24.78■■□□□ 1.56
C9orf47-202ENST00000375850 C2orf78A6NCI8 922 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 PPP6R2O75170 966 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 BDNFP23560 247 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 LMO2P25791 158 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 MPLP40238 635 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 PSMC1P62191 440 aaKnown RBP24.78■■□□□ 1.56
C9orf47-202ENST00000375850 NOP14P78316 857 aaKnown RBP24.78■■□□□ 1.56
C9orf47-202ENST00000375850 PLK5Q496M5 336 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 LMBRD2Q68DH5 695 aaPredicted RBP24.78■■□□□ 1.56
C9orf47-202ENST00000375850 TRAPPC11Q7Z392 1133 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 LINC00301Q8NCQ3 95 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 C8orf48Q96LL4 319 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 HHIPQ96QV1 700 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 FNBP1Q96RU3 617 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 PTPRJQ12913 1337 aa24.78■■□□□ 1.56
C9orf47-202ENST00000375850 SLC9A3R1O14745 358 aaPredicted RBP24.77■■□□□ 1.56
C9orf47-202ENST00000375850 HCRTO43612 131 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 STX6O43752 255 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 ATP2C2O75185 946 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 HOXC13P31276 330 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 SLC7A9P82251 487 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 CYP27A1Q02318 531 aa24.77■■□□□ 1.56
C9orf47-202ENST00000375850 SF3A2Q15428 464 aaKnown RBP24.77■■□□□ 1.56
C9orf47-202ENST00000375850 SNRNP35Q16560 246 aaKnown RBP24.77■■□□□ 1.56
C9orf47-202ENST00000375850 CCDC142Q17RM4 750 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms