RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
COL4A1-201ENST00000375820 BLOC1S6Q9UL45 172 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 SNX8Q9Y5X2 465 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 CCL15-CCL14A0A0B4J2E2 113 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 ATP6V1B2P21281 511 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 RCN1Q15293 331 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 CCL15Q16663 113 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 RASGRP2Q7LDG7 609 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 PPIL6Q8IXY8 311 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 IGDCC4Q8TDY8 1250 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 RSAD1Q9HA92 442 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 TMEM8AQ9HCN3 771 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 CDHR2Q9BYE9 1310 aa14.22□□□□□ -0.13
COL4A1-201ENST00000375820 GYPCP04921 128 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 MAPK9P45984 424 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 PTK6Q13882 451 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 TCEA2Q15560 299 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 ALX1Q15699 326 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 SGMS1Q86VZ5 419 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 DCP1BQ8IZD4 617 aaKnown RBP14.21□□□□□ -0.13
COL4A1-201ENST00000375820 KCNH7Q9NS40 1196 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 MAP10Q9P2G4 905 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 MBL2P11226 248 aaPredicted RBP14.21□□□□□ -0.13
COL4A1-201ENST00000375820 FGFR2P21802 821 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 TRIM65Q6PJ69 517 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 ENTPD7Q9NQZ7 604 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 KIF1BO60333 1816 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.13
COL4A1-201ENST00000375820 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.21□□□□□ -0.13
COL4A1-201ENST00000375820 NBPF26B4DH59 902 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 CFAP99D6REC4 459 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 TSPAN3O60637 253 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 GRK2P25098 689 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 ZNF177Q13360 481 aaPredicted RBP14.21□□□□□ -0.13
COL4A1-201ENST00000375820 NBPF15Q8N660 670 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 CALML6Q8TD86 181 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 ATG4CQ96DT6 458 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 SH3GL2Q99962 352 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 RUSC1Q9BVN2 902 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 SNX13Q9Y5W8 968 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 RPS6KL1Q9Y6S9 549 aa14.21□□□□□ -0.13
COL4A1-201ENST00000375820 UBE2Q2LH0YL09 131 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 SERPINB1P30740 379 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 DGKDQ16760 1214 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 SHROOM1Q2M3G4 852 aaPredicted RBP14.21□□□□□ -0.14
COL4A1-201ENST00000375820 LRIG3Q6UXM1 1119 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 LRRC34Q8IZ02 419 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 MXRA8Q9BRK3 442 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 SLC40A1Q9NP59 571 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 ZNRF3Q9ULT6 936 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 SOX13Q9UN79 622 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 P4HA2O15460 535 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 AP1G2O75843 785 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 DAB2IPQ5VWQ8 1189 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 POTEAQ6S8J7 498 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 PIK3R5Q8WYR1 880 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 USP13Q92995 863 aaPredicted RBP14.21□□□□□ -0.14
COL4A1-201ENST00000375820 ZFYVE28Q9HCC9 887 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 HEY2Q9UBP5 337 aa14.21□□□□□ -0.14
COL4A1-201ENST00000375820 AP3B1O00203 1094 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 CELF2O95319 508 aaKnown RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 ALDH7A1P49419 539 aaKnown RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 TMED10P49755 219 aaKnown RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 COPAP53621 1224 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 DEPDC7Q96QD5 511 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 ZNF521Q96K83 1311 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 ZC3H11AO75152 810 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 IL18RAPO95256 599 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 CAPN1P07384 714 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 EML3Q32P44 896 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 C11orf63Q6NUN7 778 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 ISLR2Q6UXK2 745 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 TC2NQ8N9U0 490 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 FBXO36Q8NEA4 188 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 CASKIN2Q8WXE0 1202 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 SLITRK1Q96PX8 696 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 NDEL1Q9GZM8 345 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 KDM5CP41229 1560 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 SH3BGRLO75368 114 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 RHOBTB3O94955 611 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 ATN1P54259 1190 aaPredicted RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 PLCL1Q15111 1095 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 DENND1BQ6P3S1 775 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 LUZP2Q86TE4 346 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 USP38Q8NB14 1042 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 JMJD4Q9H9V9 463 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 UTP6Q9NYH9 597 aaKnown RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 PHTF1Q9UMS5 762 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 SLC37A4O43826 429 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 H2AFYO75367 372 aaKnown RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 WLSQ5T9L3 541 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 RD3Q7Z3Z2 195 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 PRUNE1Q86TP1 453 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 PHACTR4Q8IZ21 702 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 TSEN34Q9BSV6 310 aaKnown RBP14.2□□□□□ -0.14
COL4A1-201ENST00000375820 NIF3L1Q9GZT8 377 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms