RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ADRA1DP25100 572 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 SCNN1BP51168 640 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 FMO1Q01740 532 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 PPP3CAQ08209 521 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 LIN52Q52LA3 116 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 IZUMO2Q6UXV1 221 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 TMEM161BQ8NDZ6 487 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 C12orf65Q9H3J6 166 aaKnown RBP13.55□□□□□ -0.24
MSH5-204ENST00000375755 PREBQ9HCU5 417 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 HSPBP1Q9NZL4 362 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 SLC4A7Q9Y6M7 1214 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 UBA1P22314 1058 aaKnown RBP13.55□□□□□ -0.24
MSH5-204ENST00000375755 SERPINB3P29508 390 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 GCLMP48507 274 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 GTF2BQ00403 316 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 MYBPC3Q14896 1274 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 CBWD2Q8IUF1 395 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 ZCCHC9Q8N567 271 aaKnown RBP13.55□□□□□ -0.24
MSH5-204ENST00000375755 CHST13Q8NET6 341 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 SENP7Q9BQF6 1050 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 PSAPP07602 524 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 NCKAP1LP55160 1127 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 LSAMPQ13449 338 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 GPR162Q16538 588 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 GPAT2Q6NUI2 795 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 HAPLN3Q96S86 360 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 PCYT2Q99447 389 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 CYP26B1Q9NR63 512 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 ANKEF1Q9NU02 776 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 UVRAGQ9P2Y5 699 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 MYPNQ86TC9 1320 aa13.55□□□□□ -0.24
MSH5-204ENST00000375755 ZNFX1Q9P2E3 1918 aaKnown RBP13.54□□□□□ -0.24
MSH5-204ENST00000375755 SUPT20HL2P0C7V6 817 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 P3H1Q32P28 736 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 DAB2IPQ5VWQ8 1189 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 CCDC89Q8N998 374 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 TOPORSQ9NS56 1045 aaPredicted RBP13.54□□□□□ -0.24
MSH5-204ENST00000375755 SENP1Q9P0U3 644 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 TBX20Q9UMR3 447 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 CDK7P50613 346 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 USP50Q70EL3 339 aaPredicted RBP13.54□□□□□ -0.24
MSH5-204ENST00000375755 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 BBOF1Q8ND07 529 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 COPS5Q92905 334 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 SKA1Q96BD8 255 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 TTC25Q96NG3 672 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 PORCNQ9H237 461 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 MMADHCQ9H3L0 296 aaPredicted RBP13.54□□□□□ -0.24
MSH5-204ENST00000375755 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
MSH5-204ENST00000375755 KMT5AQ9NQR1 393 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 CLEC11AQ9Y240 323 aa13.54□□□□□ -0.24
MSH5-204ENST00000375755 C2orf71A6NGG8 1288 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 MAFGO15525 162 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 RNASEH1O60930 286 aaKnown RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 UBE4BO95155 1302 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 RALAP11233 206 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ESRRAP11474 423 aaPredicted RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 KRT4P19013 534 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 PGM1P36871 562 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 CCNFP41002 786 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 STXBP4Q6ZWJ1 553 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 FAM71AQ8IYT1 594 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 TUBB6Q9BUF5 446 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 VPS37BQ9H9H4 285 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 PDLIM7Q9NR12 457 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 DNAAF2Q9NVR5 837 aaKnown RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 ANAPC7Q9UJX3 599 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 AGTPBP1Q9UPW5 1226 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 NFASCO94856 1347 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 PENKP01210 267 aaPredicted RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 RARBP10826 455 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ANPEPP15144 967 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 KLRC2P26717 231 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 CPA2P48052 419 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ZBTB16Q05516 673 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ANKS1BQ7Z6G8 1248 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 LRRC6Q86X45 466 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 GLIS1Q8NBF1 620 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ATP6V0A1Q93050 837 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 CCDC127Q96BQ5 260 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 KREMEN1Q96MU8 473 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 POLR3FQ9H1D9 316 aaPredicted RBP13.53□□□□□ -0.24
MSH5-204ENST00000375755 KCNK13Q9HB14 408 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ARHGEF4Q9NR80 690 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 GALNT8Q9NY28 637 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 ANGPTL2Q9UKU9 493 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 TBC1D30Q9Y2I9 924 aa13.53□□□□□ -0.24
MSH5-204ENST00000375755 FARP2O94887 1054 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms