RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CITO14578 2027 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 MGAMO43451 1857 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 ZSCAN9O15535 394 aaPredicted RBP8.64□□□□□ -1.03
UBR4-202ENST00000375224 AHCYL1O43865 530 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 AXLP30530 894 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 PSMC1P62191 440 aaKnown RBP8.64□□□□□ -1.03
UBR4-202ENST00000375224 MAP2K5Q13163 448 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 SCARA3Q6AZY7 606 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 SH2D3CQ8N5H7 860 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 SLC4A11Q8NBS3 891 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 NPLOC4Q8TAT6 608 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 PPP1R16BQ96T49 567 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 TMEM109Q9BVC6 243 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 TRAIPQ9BWF2 469 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 FRMD8P1Q9BZ68 369 aaPredicted RBP8.64□□□□□ -1.03
UBR4-202ENST00000375224 CHST7Q9NS84 486 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 EFR3BQ9Y2G0 817 aa8.64□□□□□ -1.03
UBR4-202ENST00000375224 CSDE1O75534 798 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 NAT1P18440 290 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 PSMA2P25787 234 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 GJC1P36383 396 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 RAP1GAPP47736 663 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 SNX16P57768 344 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 INCA1Q0VD86 236 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 BYSLQ13895 437 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 NOTUMQ6P988 496 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 SLC27A1Q6PCB7 646 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 CATSPER4Q7RTX7 472 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 CXorf38Q8TB03 319 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 KIF12Q96FN5 646 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 SLITRK1Q96PX8 696 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 HEMGNQ9BXL5 484 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 NDUFAB1O14561 156 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 DYNC1LI2O43237 492 aaPredicted RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 SMIM24O75264 130 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 ATF7P17544 494 aaPredicted RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 ADCY8P40145 1251 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 GABRB2P47870 512 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 CDH8P55286 799 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 PTPN20Q4JDL3 420 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 ZNF280DQ6N043 979 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 BEST2Q8NFU1 509 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 OR2W6PQ8NHA6 318 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 RNF25Q96BH1 459 aaPredicted RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 HEXIM2Q96MH2 286 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 PTPN18Q99952 460 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 NT5C1AQ9BXI3 368 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 ROPN1BQ9BZX4 212 aaPredicted RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 RABEP2Q9H5N1 569 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 SMYD3Q9H7B4 428 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 CNOT10Q9H9A5 744 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 ROPN1Q9HAT0 212 aaPredicted RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 PAPOLBQ9NRJ5 636 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 SETD4Q9NVD3 440 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 ANAPC5Q9UJX4 755 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 DRG1Q9Y295 367 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 MANSC4A6NHS7 340 aaPredicted RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 MICAL2O94851 1124 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 F2P00734 622 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 MDH1P40925 334 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 GJA8P48165 433 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 CPT1AP50416 773 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 TFDP3Q5H9I0 405 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 MORN1Q5T089 497 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 SPOCD1Q6ZMY3 1216 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 TTC13Q8NBP0 860 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 PGM2Q96G03 612 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 ELOVL4Q9GZR5 314 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 SDCBP2Q9H190 292 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 ADAMTS10Q9H324 1103 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 DDX20Q9UHI6 824 aaKnown RBP8.63□□□□□ -1.03
UBR4-202ENST00000375224 Q9Y3F1 56 aa8.63□□□□□ -1.03
UBR4-202ENST00000375224 F8VP50 259 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 XPOTO43592 962 aaKnown RBP8.62□□□□□ -1.03
UBR4-202ENST00000375224 GJB6O95452 261 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 NPTXRO95502 500 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 SMIM10L2AP0DMW4 78 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 SMIM10L2BP0DMW5 78 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 DESP17661 470 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 ATP1A2P50993 1020 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 PPP2R2AP63151 447 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 CCDC15Q0P6D6 951 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 CYP4A22Q5TCH4 519 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 GSTA5Q7RTV2 222 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 ATG4AQ8WYN0 398 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 KATNAL1Q9BW62 490 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 AP5M1Q9H0R1 490 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 ASNSD1Q9NWL6 643 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 RALGAPA2Q2PPJ7 1873 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 MBLAC1A4D2B0 266 aaPredicted RBP8.62□□□□□ -1.03
UBR4-202ENST00000375224 GOLGA8SH3BPF8 625 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 M0QYV0 167 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 ATP6V1G1O75348 118 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 RNF8O76064 485 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 CYP2C9P11712 490 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 SESN3P58005 492 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 ZNF252P-AS1Q0IIN9 211 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 CUL3Q13618 768 aa8.62□□□□□ -1.03
UBR4-202ENST00000375224 SLC29A2Q14542 456 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms