RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 STRNO43815 780 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 ZC3H11AO75152 810 aaKnown RBP eCLIP12.54□□□□□ -0.44e-6■■■■□ 22.9
TMEM38B-202ENST00000374692 ANXA13P27216 316 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 SCNN1GP51170 649 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 PITX1P78337 314 aaPredicted RBP12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 MAP2K5Q13163 448 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 SDHAF4Q5VUM1 108 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 CEP57Q86XR8 500 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 ARRDC4Q8NCT1 418 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 GPR152Q8TDT2 470 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 FAM172AQ8WUF8 416 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 CAVIN3Q969G5 261 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 MFHAS1Q9Y4C4 1052 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 STYXL1Q9Y6J8 313 aa12.54□□□□□ -0.4
TMEM38B-202ENST00000374692 TMEM191CA6NGB0 347 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 EBAG9O00559 213 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 RPS6KA5O75582 802 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CYP3A5P20815 502 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 GNL1P36915 607 aaPredicted RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 PBX3P40426 434 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CA9Q16790 459 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 HADHQ16836 314 aaKnown RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 FAM110CQ1W6H9 321 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 WSCD1Q658N2 575 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 NOTUMQ6P988 496 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 DSTYKQ6XUX3 929 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 TRIM11Q96F44 468 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CFAP36Q96G28 342 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 PRMT1Q99873 361 aaKnown RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 RBP3P10745 1247 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 SSTR1P30872 391 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 LSP1P33241 339 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 YWHAGP61981 247 aaKnown RBP eCLIP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 EFTUD2Q15029 972 aaKnown RBP eCLIP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 SNX17Q15036 470 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 FAM117BQ6P1L5 589 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 DEPDC1BQ8WUY9 529 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CD101Q93033 1021 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 WNT8BQ93098 351 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 AGAP3Q96P47 875 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 IL1RAPL1Q9NZN1 696 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CWC15Q9P013 229 aaKnown RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 MED7O43513 233 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 HUS1O60921 280 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 B3GAT3O94766 335 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CHN1P15882 459 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CA8P35219 290 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 HSPA9P38646 679 aaKnown RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 EIF3EP60228 445 aaKnown RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 PRKCZQ05513 592 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 ITIH3Q06033 890 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 ZNF354CQ86Y25 554 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 ATL2Q8NHH9 583 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 KAT2BQ92831 832 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.43e-6■■■■□ 20.9
TMEM38B-202ENST00000374692 SIK2Q9H0K1 926 aa12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 TRMT13Q9NUP7 481 aaKnown RBP12.53□□□□□ -0.4
TMEM38B-202ENST00000374692 IGKV6-21A0A0C4DH24 114 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 TJP3O95049 919 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 CD52P31358 61 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 CRADDP78560 199 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 DHX34Q14147 1143 aaKnown RBP12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 MDH1BQ5I0G3 518 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 SLC27A1Q6PCB7 646 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 UNC45BQ8IWX7 931 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 ATXN7L3BQ96GX2 97 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 SLITRK1Q96PX8 696 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 KCNK16Q96T55 309 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 PTPRHQ9HD43 1115 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 CALCOCO1Q9P1Z2 691 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 SNX10Q9Y5X0 201 aa12.52□□□□□ -0.4
TMEM38B-202ENST00000374692 PAPPA2Q9BXP8 1791 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 EXOC1LA0A1B0GW35 172 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 KCNN4O15554 427 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 ASAP2O43150 1006 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 MOCS2O96007 188 aaPredicted RBP12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 ZBTB48P10074 688 aaPredicted RBP12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 SDC4P31431 198 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 AARSP49588 968 aaKnown RBP eCLIP12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 SLC26A2P50443 739 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 ANKRD22Q5VYY1 191 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 TTC30AQ86WT1 665 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 SNF8Q96H20 258 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 B3GALT6Q96L58 329 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 NEU2Q9Y3R4 380 aa12.52□□□□□ -0.41
TMEM38B-202ENST00000374692 APRTP07741 180 aa12.51□□□□□ -0.41
TMEM38B-202ENST00000374692 OR4Q2P0C623 313 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms