RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 RBP5P82980 135 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 PTK6Q13882 451 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 HIC1Q14526 733 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 PTGISQ16647 500 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 OLFML2BQ68BL8 750 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 TLK2Q86UE8 772 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 ARFGAP2Q8N6H7 521 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 NFKBIZQ9BYH8 718 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 ZNF518BQ9C0D4 1074 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 MIS12Q9H081 205 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 ASB7Q9H672 318 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 MORF4L1Q9UBU8 362 aa19.23■□□□□ 0.67
RXRB-202ENST00000374685 A6NNZ2 444 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 FAM110CQ1W6H9 321 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 TUBB8Q3ZCM7 444 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 CXorf38Q8TB03 319 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 LRRN4Q8WUT4 740 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 STRIP2Q9ULQ0 834 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 ANK1P16157 1881 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 LIASO43766 372 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 CST8O60676 142 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 ITIH2P19823 946 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 CYP3A5P20815 502 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 PPP1R15BQ5SWA1 713 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 TAX1BP1Q86VP1 789 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 OTUD6BQ8N6M0 293 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 KCTD6Q8NC69 237 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 OR6B3Q8NGW1 331 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 TMEM40Q8WWA1 233 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 WHRNQ9P202 907 aa19.22■□□□□ 0.67
RXRB-202ENST00000374685 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.22■□□□□ 0.67
RXRB-202ENST00000374685 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.22■□□□□ 0.67
RXRB-202ENST00000374685 TREHO43280 583 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 KIAA0754O94854 1291 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 HOXA11P31270 313 aaPredicted RBP19.21■□□□□ 0.67
RXRB-202ENST00000374685 FAM187BQ17R55 369 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 GOLGA7BQ2TAP0 167 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 TFDP3Q5H9I0 405 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 YTHDF3Q7Z739 585 aaKnown RBP19.21■□□□□ 0.67
RXRB-202ENST00000374685 CCDC89Q8N998 374 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 GCOM2Q9BZD3 368 aaPredicted RBP19.21■□□□□ 0.67
RXRB-202ENST00000374685 SCN1AP35498 2009 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 BANF1O75531 89 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 PIAS1O75925 651 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 NUDT17P0C025 328 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 GBP1P32455 592 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 MMRN1Q13201 1228 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 TAF1CQ15572 869 aaPredicted RBP19.21■□□□□ 0.67
RXRB-202ENST00000374685 AGBL2Q5U5Z8 902 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 CCT8L2Q96SF2 557 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 TRAIPQ9BWF2 469 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 EPN3Q9H201 632 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 GPATCH2LQ9NWQ4 482 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 CACNG4Q9UBN1 327 aa19.21■□□□□ 0.67
RXRB-202ENST00000374685 hCG_1818297A0A087WSY0 165 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 RBM47A0AV96 593 aaKnown RBP19.2■□□□□ 0.66
RXRB-202ENST00000374685 SIGLEC16A6NMB1 481 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 CREB1P16220 341 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 MAN1A1P33908 653 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 LRRC14Q15048 493 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 PPP1R26Q5T8A7 1209 aaPredicted RBP19.2■□□□□ 0.66
RXRB-202ENST00000374685 NLRP14Q86W24 1093 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 RFX6Q8HWS3 928 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 B3GNT5Q9BYG0 378 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 RNF39Q9H2S5 420 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 SLC12A6Q9UHW9 1150 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 BARX2Q9UMQ3 279 aaPredicted RBP19.2■□□□□ 0.66
RXRB-202ENST00000374685 IGF2BP3O00425 579 aaKnown RBP eCLIP19.2■□□□□ 0.66
RXRB-202ENST00000374685 RECQL4O94761 1208 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 MIPP30301 263 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 CDKN2BP42772 138 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 GPD2P43304 727 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 ZNF157P51786 506 aaPredicted RBP19.2■□□□□ 0.66
RXRB-202ENST00000374685 MYO1EQ12965 1108 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 PPP1R2P3Q6NXS1 205 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 SCUBE3Q8IX30 993 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 ACTL9Q8TC94 416 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 NT5C1AQ9BXI3 368 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 DPEP3Q9H4B8 488 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 NGRNQ9NPE2 291 aaKnown RBP19.2■□□□□ 0.66
RXRB-202ENST00000374685 NEBLO76041 1014 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 RNF8O76064 485 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 PAEPP09466 180 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 OTUD4Q01804 1114 aaKnown RBP19.2■□□□□ 0.66
RXRB-202ENST00000374685 IQSEC1Q6DN90 963 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 CCDC33Q8N5R6 958 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 EMID1Q96A84 441 aaPredicted RBP19.2■□□□□ 0.66
RXRB-202ENST00000374685 CFAP57Q96MR6 1250 aa19.2■□□□□ 0.66
RXRB-202ENST00000374685 HTTP42858 3142 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 CITO14578 2027 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 CHN1P15882 459 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 PDGFRAP16234 1089 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 PAX7P23759 505 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 ADORA2BP29275 332 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 CDH5P33151 784 aaPredicted RBP19.19■□□□□ 0.66
RXRB-202ENST00000374685 FASTKD3Q14CZ7 662 aaKnown RBP19.19■□□□□ 0.66
RXRB-202ENST00000374685 HADHQ16836 314 aaKnown RBP19.19■□□□□ 0.66
RXRB-202ENST00000374685 FAM183BPQ6ZVS7 135 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 MYCBPAPQ8TBZ2 947 aa19.19■□□□□ 0.66
RXRB-202ENST00000374685 ZNF473Q8WTR7 871 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms