RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 MTA2O94776 668 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 NFICP08651 508 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 GCNT1Q02742 428 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 SOX4Q06945 474 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-203ENST00000374116 PPP2R5EQ16537 467 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 ZACNQ401N2 412 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 JADE1Q6IE81 842 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 ENOSF1Q7L5Y1 443 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 NOP9Q86U38 636 aaKnown RBP15.1■□□□□ 0.01
HMGA1-203ENST00000374116 TSEN2Q8NCE0 465 aaKnown RBP15.1■□□□□ 0.01
HMGA1-203ENST00000374116 CCDC26Q8TAB7 109 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 RUFY1Q96T51 708 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 C17orf80Q9BSJ5 609 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 AP1M1Q9BXS5 423 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 EPN3Q9H201 632 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 CTTNBP2NLQ9P2B4 639 aa15.1■□□□□ 0.01
HMGA1-203ENST00000374116 PTPRJQ12913 1337 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 KIAA1671Q9BY89 1806 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 ESYT3A0FGR9 886 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 LINC01553A4QN01 128 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 ZSCAN5CA6NGD5 496 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-203ENST00000374116 CYP26A1O43174 497 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 LDHAP00338 332 aaKnown RBP15.09■□□□□ 0.01
HMGA1-203ENST00000374116 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
HMGA1-203ENST00000374116 MAATS1Q7Z4T9 603 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 N4BP2L2Q92802 583 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-203ENST00000374116 TATDN2Q93075 761 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 KIF12Q96FN5 646 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 PCDHB18PQ96TA0 734 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 CWH43Q9H720 699 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 NRDE2Q9H7Z3 1164 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 TUBGCP4Q9UGJ1 667 aa15.09■□□□□ 0.01
HMGA1-203ENST00000374116 HOXA2O43364 376 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 THP07101 528 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 LINC00271P0C7V0 271 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 TTMPQ5BVD1 217 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 CEP85LQ5SZL2 805 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 NAA35Q5VZE5 725 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 TLDC1Q6P9B6 456 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 C6orf89Q6UWU4 347 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 TMEM173Q86WV6 379 aaPredicted RBP15.08■□□□□ 0.01
HMGA1-203ENST00000374116 CD302Q8IX05 232 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 FIBCD1Q8N539 461 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 URGCPQ8TCY9 931 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 HASPINQ8TF76 798 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 DDX1Q92499 740 aaKnown RBP15.08■□□□□ 0.01
HMGA1-203ENST00000374116 FAM161BQ96MY7 647 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 CD248Q9HCU0 757 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 UBN1Q9NPG3 1134 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 CNTN3Q9P232 1028 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 MSRAQ9UJ68 235 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 PCDHA11Q9Y5I1 949 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 ALG6Q9Y672 507 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 EYSQ5T1H1 3165 aa15.08■□□□□ 0.01
HMGA1-203ENST00000374116 FGGP02679 453 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 FAM153BP0C7A2 387 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 CYP11B1P15538 503 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 PDE6CP51160 858 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 SLC8A3P57103 927 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 CDR2Q01850 454 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 TAP1Q03518 808 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 LRIT3Q3SXY7 679 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 FAM153CQ494X1 144 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 CFAP58Q5T655 872 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 PPP2R2DQ66LE6 453 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 SLC47A2Q86VL8 602 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 BRSK2Q8IWQ3 736 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 CMTR2Q8IYT2 770 aaKnown RBP15.08■□□□□ 0
HMGA1-203ENST00000374116 IQCKQ8N0W5 287 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 LRRC43Q8N309 656 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 UBL4BQ8N7F7 174 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 FAM193BQ96PV7 902 aaPredicted RBP15.08■□□□□ 0
HMGA1-203ENST00000374116 PPP1R10Q96QC0 940 aaKnown RBP15.08■□□□□ 0
HMGA1-203ENST00000374116 DDX47Q9H0S4 455 aaKnown RBP15.08■□□□□ 0
HMGA1-203ENST00000374116 FAM153AQ9UHL3 310 aa15.08■□□□□ 0
HMGA1-203ENST00000374116 PRG3Q9Y2Y8 225 aaPredicted RBP15.08■□□□□ 0
HMGA1-203ENST00000374116 PDCD11Q14690 1871 aaKnown RBP15.07■□□□□ 0
HMGA1-203ENST00000374116 NLRC5Q86WI3 1866 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 GOLGA6L10A0A0M3HER8 536 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 VNN1O95497 513 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 TFAMQ00059 246 aaKnown RBP15.07■□□□□ 0
HMGA1-203ENST00000374116 FMO1Q01740 532 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 XKR4Q5GH76 650 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 DCAF12L1Q5VU92 463 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 TDRD10Q5VZ19 366 aaKnown RBP15.07■□□□□ 0
HMGA1-203ENST00000374116 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
HMGA1-203ENST00000374116 ELMO3Q96BJ8 720 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 TIFAQ96CG3 184 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 SLC28A3Q9HAS3 691 aa15.07■□□□□ 0
HMGA1-203ENST00000374116 RALGAPA2Q2PPJ7 1873 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 A0A1W2PPC1 479 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 RFXAPO00287 272 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 CYP1A2P05177 515 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 MMEP08473 750 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 LSP1P33241 339 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 HSPA9P38646 679 aaKnown RBP15.06■□□□□ 0
HMGA1-203ENST00000374116 OR1G1P47890 313 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 SLC11A1P49279 550 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 CLCNKBP51801 687 aa15.06■□□□□ 0
HMGA1-203ENST00000374116 SMAD3P84022 425 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms