RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SYNCRIPO60506 623 aaKnown RBP11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 ALDH2P05091 517 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 AKR1A1P14550 325 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 CACHD1Q5VU97 1274 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 NIPA1Q7RTP0 329 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 ATP8B4Q8TF62 1192 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 TSEN34Q9BSV6 310 aaKnown RBP11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 PCMTD2Q9NV79 361 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 AURKCQ9UQB9 309 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 DTNAQ9Y4J8 743 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 CABYRO75952 493 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 FKBP1AP62942 108 aaKnown RBP11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 C3orf20Q8ND61 904 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 ANKS1AQ92625 1134 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 FBXO44Q9H4M3 255 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 COPS7BQ9H9Q2 264 aaPredicted RBP11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 PPP1R37O75864 691 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 KLRC1P26715 233 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 FKBP1CQ5VVH2 108 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 GRAMD4Q6IC98 578 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 COL23A1Q86Y22 540 aaPredicted RBP11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 APOL5Q9BWW9 433 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 LNPEPQ9UIQ6 1025 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 SLC39A10Q9ULF5 831 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 ARHGEF9O43307 516 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 TBC1D4O60343 1298 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 FKBP9O95302 570 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 VCAM1P19320 739 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 LRRC14Q15048 493 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 FKBP9P1Q75LS8 142 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 ZNF438Q7Z4V0 828 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 KRT78Q8N1N4 520 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 ERP44Q9BS26 406 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
PHACTR4-202ENST00000373839 ABCA6Q8N139 1617 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 TECPR2O15040 1411 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 RHOCP08134 193 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 ZNF135P52742 658 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 INHBEP58166 350 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 GFM2Q969S9 779 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 PDCD2LQ9BRP1 358 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 ADGRE3Q9BY15 652 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 SYTL2Q9HCH5 934 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 PXMP2Q9NR77 195 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 TOMM70O94826 608 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 PGK2P07205 417 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 IL1R1P14778 569 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 DSG3P32926 999 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 FMR1Q06787 632 aaKnown RBP eCLIP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 DMTNQ08495 405 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 TJAP1Q5JTD0 557 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 ERAP2Q6P179 960 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 INTS5Q6P9B9 1019 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 C3orf62Q6ZUJ4 267 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 SLFN11Q7Z7L1 901 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 APBB2Q92870 758 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 LRRC1Q9BTT6 524 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 UXTQ9UBK9 157 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 MSCO60682 206 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 MZF1P28698 734 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 BST2Q10589 180 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 CAMK2GQ13555 558 aaPredicted RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 PDIA6Q15084 440 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 ZDHHC17Q8IUH5 632 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 MYO1HQ8N1T3 1032 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 C9orf72Q96LT7 481 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 GANQ9H2C0 597 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 ABHD16BQ9H3Z7 469 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 CCDC134Q9H6E4 229 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 CAMSAP1Q5T5Y3 1602 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 SNTNA6NMZ2 147 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 C2CD2LO14523 706 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 XYLBO75191 536 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 GLRA3O75311 464 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 CLCN3P51790 818 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 C16orf87Q6PH81 154 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 TMC7Q7Z402 723 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 MAN1C1Q9NR34 630 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 TLR8Q9NR97 1041 aaKnown RBP11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 PLA2G4CQ9UP65 541 aa11.51□□□□□ -0.57
PHACTR4-202ENST00000373839 H3BRB1 525 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 MAP3K13O43283 966 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 CNTFP26441 200 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 NPTX2P47972 431 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 STX5Q13190 355 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 ZNF410Q86VK4 478 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 GSPT2Q8IYD1 628 aaKnown RBP11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 ACER1Q8TDN7 264 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 FAM162AQ96A26 154 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 CNPY3Q9BT09 278 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 ZCCHC2Q9C0B9 1178 aaKnown RBP11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 LRRC40Q9H9A6 602 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 APPL1Q9UKG1 709 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 AMHP03971 560 aa11.5□□□□□ -0.57
PHACTR4-202ENST00000373839 PAX3P23760 479 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms