RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 TBX22Q9Y458 520 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 KANSL1LA0AUZ9 987 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 ITGALP20701 1170 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 KNOP1Q1ED39 458 aaKnown RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 SGSM1Q2NKQ1 1148 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 CNPY3Q9BT09 278 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 ABCG4Q9H172 646 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 PLXNC1O60486 1568 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 STAU1O95793 577 aaKnown RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 MSH3P20585 1137 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 CENPLQ8N0S6 344 aaPredicted RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 GRAMD1AQ96CP6 724 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 EXTL3O43909 919 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 CCDC166P0CW27 439 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 IFNEQ86WN2 208 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 SEPT12Q8IYM1 358 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 ATL2Q8NHH9 583 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 LGR6Q9HBX8 967 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 SOHLH2Q9NX45 425 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 SNX9Q9Y5X1 595 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 PRPF3O43395 683 aaKnown RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 PALMO75781 387 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 NDUFA10O95299 355 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 PAICSP22234 425 aaKnown RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 TSNQ15631 228 aaKnown RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 FAM220AQ7Z4H9 259 aa9.43□□□□□ -0.9
CSMD2-205ENST00000373381 R3HCC1LQ7Z5L2 792 aaKnown RBP9.43□□□□□ -0.9
CSMD2-205ENST00000373381 RRN3P2A6NIE6 340 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 STX11O75558 287 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 RPL10AP62906 217 aaKnown RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 PLOD1Q02809 727 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 PGS1Q32NB8 556 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 USP41Q3LFD5 358 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CCDC126Q96EE4 140 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ZNF333Q96JL9 665 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 COL17A1Q9UMD9 1497 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CD2BP2O95400 341 aaKnown RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 PGM1P36871 562 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 TMED10P49755 219 aaKnown RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 TAB1Q15750 504 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SMAD1Q15797 465 aaKnown RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ULK3Q6PHR2 472 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 UNC13DQ70J99 1090 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 IPMKQ8NFU5 416 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SLC9A7Q96T83 725 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 NFKB1P19838 968 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SPAG6O75602 509 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 PAX3P23760 479 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SPRP35270 261 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 MTA1Q13330 715 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CARNMT1Q8N4J0 409 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 RTTNQ86VV8 2226 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 KIAA0100Q14667 2235 aaKnown RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 GUCY1B2O75343 617 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 FGFR1P11362 822 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 IGFBP4P22692 258 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 BTKQ06187 659 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ATP13A4Q4VNC1 1196 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 PEX5LQ8IYB4 626 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ELP3Q9H9T3 547 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ASXL2Q76L83 1435 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 A0A087WZ62 844 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CFAP73A6NFT4 308 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SPTLC1O15269 473 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 THPOP40225 353 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ALDH9A1P49189 494 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 MYO1HQ8N1T3 1032 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SLC25A41Q8N5S1 370 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 UBE2Q2Q8WVN8 375 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CIPCQ9C0C6 399 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SLC25A12O75746 678 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 AP1S1P61966 158 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 TKFCQ3LXA3 575 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 NT5C1AQ9BXI3 368 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 TEX13BQ9BXU2 312 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 WDR62O43379 1518 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CHP2O43745 196 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SUPT20HL2P0C7V6 817 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 TRIM49P0CI25 452 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 TRIM49CP0CI26 452 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 NCOA4Q13772 614 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 RD3Q7Z3Z2 195 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SYNE4Q8N205 404 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 HMG20AQ9NP66 347 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CHORDC1Q9UHD1 332 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 ENO3P13929 434 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 HSPA13P48723 471 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 RENBPP51606 427 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SLC39A14Q15043 492 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 TRIQKQ629K1 86 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 NAPEPLDQ6IQ20 393 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 SMYD4Q8IYR2 804 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-205ENST00000373381 LRRC71Q8N4P6 559 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 C19orf81C9J6K1 198 aa9.42□□□□□ -0.9
CSMD2-205ENST00000373381 CACTIN-AS1Q8N1I8 211 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms