RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 GPX6P59796 221 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 TAP1Q03518 808 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 C15orf59Q2T9L4 293 aaPredicted RBP25.02■■□□□ 1.6
CDK9-201ENST00000373264 ILDR2Q71H61 639 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 TMEM176AQ96HP8 235 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 ACTR5Q9H9F9 607 aaPredicted RBP25.02■■□□□ 1.6
CDK9-201ENST00000373264 PPME1Q9Y570 386 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.02■■□□□ 1.6
CDK9-201ENST00000373264 SSTR1P30872 391 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 PTPN7P35236 360 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 CCDC142Q17RM4 750 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 MAMDC4Q6UXC1 1216 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 FAM47EQ6ZV65 393 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 CPT1BQ92523 772 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 MPHOSPH6Q99547 160 aaKnown RBP25.02■■□□□ 1.6
CDK9-201ENST00000373264 CALN1Q9BXU9 219 aa25.02■■□□□ 1.6
CDK9-201ENST00000373264 A0A1W2PPM1 405 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 GPD2P43304 727 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 MKRN3Q13064 507 aaKnown RBP25.01■■□□□ 1.59
CDK9-201ENST00000373264 ITIH4Q14624 930 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 CDO1Q16878 200 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 FAM102AQ5T9C2 384 aaPredicted RBP25.01■■□□□ 1.59
CDK9-201ENST00000373264 TRPM8Q7Z2W7 1104 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 FAM71DQ8N9W8 422 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 KCTD6Q8NC69 237 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 HPDLQ96IR7 371 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 CFAP57Q96MR6 1250 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 GRID1Q9ULK0 1009 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.01■■□□□ 1.59
CDK9-201ENST00000373264 TRIP11Q15643 1979 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 IL18RAPO95256 599 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 RPL22P35268 128 aaKnown RBP25.01■■□□□ 1.59
CDK9-201ENST00000373264 ADCYAP1R1P41586 468 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 MYO1EQ12965 1108 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 MORF4L2Q15014 288 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 TAPT1Q6NXT6 567 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 POLNQ7Z5Q5 900 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 RFX6Q8HWS3 928 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 LPIN3Q9BQK8 851 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 CCDC77Q9BR77 488 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 PCDH9Q9HC56 1237 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 CD248Q9HCU0 757 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 KLC4Q9NSK0 619 aa25.01■■□□□ 1.59
CDK9-201ENST00000373264 PRMT7Q9NVM4 692 aaPredicted RBP25.01■■□□□ 1.59
CDK9-201ENST00000373264 CLUHO75153 1309 aa25■■□□□ 1.59
CDK9-201ENST00000373264 MED7O43513 233 aa25■■□□□ 1.59
CDK9-201ENST00000373264 PHKA2P46019 1235 aa25■■□□□ 1.59
CDK9-201ENST00000373264 RGS7P49802 495 aa25■■□□□ 1.59
CDK9-201ENST00000373264 NDST1P52848 882 aa25■■□□□ 1.59
CDK9-201ENST00000373264 TMEM62Q0P6H9 643 aa25■■□□□ 1.59
CDK9-201ENST00000373264 TRABD2AQ86V40 505 aa25■■□□□ 1.59
CDK9-201ENST00000373264 FUKQ8N0W3 1084 aa25■■□□□ 1.59
CDK9-201ENST00000373264 FARP1Q9Y4F1 1045 aaPredicted RBP25■■□□□ 1.59
CDK9-201ENST00000373264 TMEM63AO94886 807 aa25■■□□□ 1.59
CDK9-201ENST00000373264 UBOX5O94941 541 aa25■■□□□ 1.59
CDK9-201ENST00000373264 MAP3K6O95382 1288 aa25■■□□□ 1.59
CDK9-201ENST00000373264 GINS2Q9Y248 185 aa25■■□□□ 1.59
CDK9-201ENST00000373264 PPEF2O14830 753 aa24.99■■□□□ 1.59
CDK9-201ENST00000373264 ABHD2P08910 425 aa24.99■■□□□ 1.59
CDK9-201ENST00000373264 PPIL2Q13356 520 aa24.99■■□□□ 1.59
CDK9-201ENST00000373264 BBS12Q6ZW61 710 aa24.99■■□□□ 1.59
CDK9-201ENST00000373264 RMDN2Q96LZ7 410 aa24.99■■□□□ 1.59
CDK9-201ENST00000373264 USP18Q9UMW8 372 aa24.99■■□□□ 1.59
CDK9-201ENST00000373264 USP15Q9Y4E8 981 aaPredicted RBP24.99■■□□□ 1.59
CDK9-201ENST00000373264 ALOX15BO15296 676 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 SLC26A2P50443 739 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 ZC3H18Q86VM9 953 aaKnown RBP24.98■■□□□ 1.59
CDK9-201ENST00000373264 EXOC8Q8IYI6 725 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 CCHCR1Q8TD31 782 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 NLRP7Q8WX94 980 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 NSRP1Q9H0G5 558 aaKnown RBP24.98■■□□□ 1.59
CDK9-201ENST00000373264 C12orf65Q9H3J6 166 aaKnown RBP24.98■■□□□ 1.59
CDK9-201ENST00000373264 PNMA3Q9UL41 463 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 E5RJQ4 531 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 HCRTO43612 131 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 KRT15P19012 456 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 TAC1P20366 129 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 HIF1AQ16665 826 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 CYB5D1Q6P9G0 228 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 CYP4V2Q6ZWL3 525 aaPredicted RBP24.98■■□□□ 1.59
CDK9-201ENST00000373264 ADPGKQ9BRR6 497 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 GPATCH2LQ9NWQ4 482 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 NKIRAS1Q9NYS0 192 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 SLC12A4Q9UP95 1085 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 SCN1AP35498 2009 aa24.98■■□□□ 1.59
CDK9-201ENST00000373264 TRUB2O95900 331 aaKnown RBP24.97■■□□□ 1.59
CDK9-201ENST00000373264 KRT7P08729 469 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 MGAT5Q09328 741 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 HADHQ16836 314 aaKnown RBP24.97■■□□□ 1.59
CDK9-201ENST00000373264 LINC01465Q8N7H1 131 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 MCRS1Q96EZ8 462 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 TRABDQ9H4I3 376 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 OSBPP22059 807 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 RPA3P35244 121 aaPredicted RBP24.97■■□□□ 1.59
CDK9-201ENST00000373264 MNAT1P51948 309 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 ATP11AP98196 1134 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 TMEM132DQ14C87 1099 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 ICE2Q659A1 982 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 FAM183BPQ6ZVS7 135 aa24.97■■□□□ 1.59
CDK9-201ENST00000373264 CENPUQ71F23 418 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms