RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 TXNRD3NBQ6F5E7 133 aa16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 TMEM110Q86TL2 294 aa16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 ZNF598Q86UK7 904 aaKnown RBP16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 ANKRD52Q8NB46 1076 aa16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 STK32AQ8WU08 396 aa16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 PGBD4Q96DM1 585 aa16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 PIWIL1Q96J94 861 aaKnown RBP16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 MIS12Q9H081 205 aa16.41■□□□□ 0.22
GTF3C5-204ENST00000372108 KBTBD13C9JR72 458 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 ATP2C2O75185 946 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 POMCP01189 267 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 RALAP11233 206 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 SKIP12755 728 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 PTGIRP43119 386 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 EPHB4P54760 987 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 OR6B2Q6IFH4 312 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 DDX42Q86XP3 938 aaKnown RBP eCLIP16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 CCDC50Q8IVM0 306 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 B3GALNT2Q8NCR0 500 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 SEC14L1Q92503 715 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 TNIP3Q96KP6 325 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 RGS18Q9NS28 235 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 KLHL11Q9NVR0 708 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 PCYOX1Q9UHG3 505 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 LRCH4O75427 683 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 CDK7P50613 346 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 BST2Q10589 180 aaKnown RBP16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 DHX34Q14147 1143 aaKnown RBP16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 TRNP1Q6NT89 227 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 OLFML1Q6UWY5 402 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 RCOR2Q8IZ40 523 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 C12orf50Q8NA57 414 aaPredicted RBP16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 SLC2A14Q8TDB8 520 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 RNF25Q96BH1 459 aaPredicted RBP16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 TRIM51Q9BSJ1 452 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 HEMGNQ9BXL5 484 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 UBN1Q9NPG3 1134 aa16.4■□□□□ 0.22
GTF3C5-204ENST00000372108 PI4K2BG5E9Z4 385 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 FAM153BP0C7A2 387 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 ACAT1P24752 427 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 TKTP29401 623 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 ECHS1P30084 290 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 COILP38432 576 aaPredicted RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 BCAT1P54687 386 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 SLC25A11Q02978 314 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 KLF1Q13351 362 aaPredicted RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 CCDC142Q17RM4 750 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 FAM153CQ494X1 144 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 KIAA0319Q5VV43 1072 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 EMBQ6PCB8 327 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 CCDC137Q6PK04 289 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 SND1Q7KZF4 910 aaKnown RBP eCLIP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 SCUBE3Q8IX30 993 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 KRT222Q8N1A0 295 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 CAVIN3Q969G5 261 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 OSBPL8Q9BZF1 889 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 DNAI2Q9GZS0 605 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 LRRC19Q9H756 370 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 FAM153AQ9UHL3 310 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 UTP11Q9Y3A2 253 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 FAM187AA6NFU0 413 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 C2CD4BA6NLJ0 364 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 PTPN1P18031 435 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 IL1R2P27930 398 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 RPL34P49207 117 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 AARSP49588 968 aaKnown RBP eCLIP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 CUL1Q13616 776 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 JAMLQ86YT9 394 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 EIF1ADQ8N9N8 165 aaKnown RBP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 MAIP1Q8WWC4 291 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 C1orf54Q8WWF1 131 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 LINC01599Q8WXQ3 324 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 KHSRPQ92945 711 aaKnown RBP eCLIP16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 SLITRK1Q96PX8 696 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 INPP5FQ9Y2H2 1132 aa16.39■□□□□ 0.21
GTF3C5-204ENST00000372108 C9IYK1 514 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 DNM1LO00429 736 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 PAPSS1O43252 624 aaPredicted RBP16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 DAPK3O43293 454 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 GRAP2O75791 330 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 MYCP01106 439 aaPredicted RBP16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 KRT1P04264 644 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 ZNF143P52747 638 aaPredicted RBP16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 GRIK3Q13003 919 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 TAF5Q15542 800 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 TIGD5Q53EQ6 642 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 DUPD1Q68J44 220 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 DSTYKQ6XUX3 929 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 POLNQ7Z5Q5 900 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 FUKQ8N0W3 1084 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 TMEM86AQ8N2M4 240 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 RAPGEF5Q92565 580 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 ACSF2Q96CM8 615 aaPredicted RBP16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 RBM41Q96IZ5 413 aaKnown RBP16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 HNRNPABQ99729 332 aaKnown RBP16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 ERP44Q9BS26 406 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 B3GNT5Q9BYG0 378 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 UBXN6Q9BZV1 441 aa16.38■□□□□ 0.21
GTF3C5-204ENST00000372108 DDX43Q9NXZ2 648 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms