RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 ATF6P18850 670 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 KCNQ1P51787 676 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 VEPH1Q14D04 833 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 SYCP1Q15431 976 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 SMAD2Q15796 467 aaKnown RBP16.91■□□□□ 0.3
PFDN4-201ENST00000371419 ARHGAP44Q17R89 818 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 KLHDC7AQ5VTJ3 777 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 SMYD5Q6GMV2 418 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 FAM35AQ86V20 835 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.91■□□□□ 0.3
PFDN4-201ENST00000371419 SCN4BQ8IWT1 228 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 SLC2A14Q8TDB8 520 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 CYFIP2Q96F07 1278 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 ERGIC2Q96RQ1 377 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 CEP72Q9P209 647 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 DNAJC12Q9UKB3 198 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 CNTN6Q9UQ52 1028 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 SIK3Q9Y2K2 1263 aa16.91■□□□□ 0.3
PFDN4-201ENST00000371419 A0A1B0GTH6 734 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 TRIM66O15016 1216 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 PAEPP09466 180 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 KRT5P13647 590 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 PTPN2P17706 415 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 RFX1P22670 979 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 GRIK1P39086 918 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 KLK7P49862 253 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 UBASH3AP57075 661 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 DDR2Q16832 855 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 PAQR9Q6ZVX9 377 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 GRASPQ7Z6J2 395 aaPredicted RBP16.9■□□□□ 0.3
PFDN4-201ENST00000371419 ITIH5Q86UX2 942 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 RBBP8NLQ8NC74 664 aaPredicted RBP16.9■□□□□ 0.3
PFDN4-201ENST00000371419 SMARCD1Q96GM5 515 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 PCMTD1Q96MG8 357 aaPredicted RBP16.9■□□□□ 0.3
PFDN4-201ENST00000371419 NAP1L5Q96NT1 182 aaPredicted RBP16.9■□□□□ 0.3
PFDN4-201ENST00000371419 HNRNPABQ99729 332 aaKnown RBP16.9■□□□□ 0.3
PFDN4-201ENST00000371419 WDR6Q9NNW5 1121 aaKnown RBP16.9■□□□□ 0.3
PFDN4-201ENST00000371419 HCFC1R1Q9NWW0 138 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 DNMT3BQ9UBC3 853 aaKnown RBP16.9■□□□□ 0.3
PFDN4-201ENST00000371419 KIAA1257Q9ULG3 409 aa16.9■□□□□ 0.3
PFDN4-201ENST00000371419 C2orf16Q68DN1 1984 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 RNF225M0QZC1 329 aaPredicted RBP16.89■□□□□ 0.29
PFDN4-201ENST00000371419 TEX33O43247 280 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 IL9P15248 144 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 UCHL3P15374 230 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 CD19P15391 556 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 ANXA13P27216 316 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 ADORA2BP29275 332 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 GPR15P49685 360 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 ZNF132P52740 706 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 DNAJB7Q7Z6W7 309 aaPredicted RBP16.89■□□□□ 0.29
PFDN4-201ENST00000371419 GIPC2Q8TF65 315 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 SHC3Q92529 594 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 PSMG2Q969U7 264 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 C8orf48Q96LL4 319 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 ZNF830Q96NB3 372 aaPredicted RBP16.89■□□□□ 0.29
PFDN4-201ENST00000371419 CORO1BQ9BR76 489 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 POMKQ9H5K3 350 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 FAM207AQ9NSI2 230 aaPredicted RBP16.89■□□□□ 0.29
PFDN4-201ENST00000371419 AJAP1Q9UKB5 411 aaPredicted RBP16.89■□□□□ 0.29
PFDN4-201ENST00000371419 FHOD1Q9Y613 1164 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 PTPRDP23468 1912 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 CLUHO75153 1309 aa16.89■□□□□ 0.29
PFDN4-201ENST00000371419 C5orf42Q9H799 3197 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 AP1G2O75843 785 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 FAM200BP0CF97 657 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 VDRP11473 427 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 CACNA2D1P54289 1103 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 RAPGEF1Q13905 1077 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 NR1I3Q14994 352 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 TAF12Q16514 161 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 PABPC1LQ4VXU2 614 aaKnown RBP16.88■□□□□ 0.29
PFDN4-201ENST00000371419 SGO2Q562F6 1265 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 PPP1R26Q5T8A7 1209 aaPredicted RBP16.88■□□□□ 0.29
PFDN4-201ENST00000371419 SDHAF4Q5VUM1 108 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 ARHGAP17Q68EM7 881 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 LEMD2Q8NC56 503 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 GPR152Q8TDT2 470 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 SPATA17Q96L03 361 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 NAA15Q9BXJ9 866 aaKnown RBP16.88■□□□□ 0.29
PFDN4-201ENST00000371419 GANQ9H2C0 597 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 DMAP1Q9NPF5 467 aaPredicted RBP16.88■□□□□ 0.29
PFDN4-201ENST00000371419 ASAH2Q9NR71 780 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 KRT82Q9NSB4 513 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 DAAM1Q9Y4D1 1078 aa16.88■□□□□ 0.29
PFDN4-201ENST00000371419 F8VP50 259 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 NOL4O94818 638 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 RHOP08100 348 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 BMP1P13497 986 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 USP8P40818 1118 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 NTHL1P78549 312 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 CYP4A22Q5TCH4 519 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 NEK11Q8NG66 645 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 PHF7Q9BWX1 381 aaPredicted RBP16.87■□□□□ 0.29
PFDN4-201ENST00000371419 STK33Q9BYT3 514 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 KCNF1Q9H3M0 494 aa16.87■□□□□ 0.29
PFDN4-201ENST00000371419 AVENQ9NQS1 362 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms