RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 GUCY2DQ02846 1103 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 BST2Q10589 180 aaKnown RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 BFSP2Q13515 415 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 CYP1B1Q16678 543 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 CCDC142Q17RM4 750 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 TIGD5Q53EQ6 642 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 FAM102AQ5T9C2 384 aaPredicted RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 TRNP1Q6NT89 227 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 DSTYKQ6XUX3 929 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 TMEM86AQ8N2M4 240 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 EXD1Q8NHP7 514 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 SLC2A14Q8TDB8 520 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 CASKIN2Q8WXE0 1202 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 PIWIL1Q96J94 861 aaKnown RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 HNRNPABQ99729 332 aaKnown RBP18.47■□□□□ 0.55
SSBP3-203ENST00000371319 HERPUD2Q9BSE4 406 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 PLVAPQ9BX97 442 aa18.47■□□□□ 0.55
SSBP3-203ENST00000371319 GJC1P36383 396 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 PPP2R5EQ16537 467 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 ATP13A4Q4VNC1 1196 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 OLFML1Q6UWY5 402 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 ANKS1BQ7Z6G8 1248 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 IFT20Q8IY31 132 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 AENQ8WTP8 325 aaKnown RBP18.46■□□□□ 0.55
SSBP3-203ENST00000371319 UROC1Q96N76 676 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 FUT8Q9BYC5 575 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 RNF208Q9H0X6 261 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 EPB41L5Q9HCM4 733 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.46■□□□□ 0.553e-6■■■□□ 18.1
SSBP3-203ENST00000371319 DDX43Q9NXZ2 648 aaKnown RBP18.46■□□□□ 0.55
SSBP3-203ENST00000371319 FAM53CQ9NYF3 392 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 AMACRQ9UHK6 382 aa18.46■□□□□ 0.55
SSBP3-203ENST00000371319 TANC1Q9C0D5 1861 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 LHX1P48742 406 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 MAP9Q49MG5 647 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 CLLU1OSQ5K130 101 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 TXNRD3NBQ6F5E7 133 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 PAQR9Q6ZVX9 377 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 FUKQ8N0W3 1084 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 C12orf50Q8NA57 414 aaPredicted RBP18.45■□□□□ 0.54
SSBP3-203ENST00000371319 CCDC26Q8TAB7 109 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 FTHL17Q9BXU8 183 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 CYLDQ9NQC7 956 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 WBP1LQ9NX94 342 aa18.45■□□□□ 0.54
SSBP3-203ENST00000371319 TIMM13Q9Y5L4 95 aaPredicted RBP18.45■□□□□ 0.54
SSBP3-203ENST00000371319 C2CD4BA6NLJ0 364 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 TTI1O43156 1089 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 PAPSS1O43252 624 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-203ENST00000371319 B4GALT3O60512 393 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 LRCH4O75427 683 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 GPD1P21695 349 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 PTGIRP43119 386 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 MNX1P50219 401 aaPredicted RBP18.44■□□□□ 0.54
SSBP3-203ENST00000371319 SLC6A3Q01959 620 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 SLC25A11Q02978 314 aaKnown RBP18.44■□□□□ 0.54
SSBP3-203ENST00000371319 PLEKHG4Q58EX7 1191 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 TTC27Q6P3X3 843 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 RCOR2Q8IZ40 523 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 KHSRPQ92945 711 aaKnown RBP eCLIP18.44■□□□□ 0.546e-7■■■□□ 16.7
SSBP3-203ENST00000371319 SYT15Q9BQS2 421 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 CRTAC1Q9NQ79 661 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 KLHL11Q9NVR0 708 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 MTUS1Q9ULD2 1270 aa18.44■□□□□ 0.54
SSBP3-203ENST00000371319 ESYT3A0FGR9 886 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 I3L4J1 428 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 M0QZQ0 153 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 CLDN5O00501 218 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 DPYSL4O14531 572 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 MAP2K7O14733 419 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 CAPN15O75808 1086 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 KRT1P04264 644 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 CYP11A1P05108 521 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 RALAP11233 206 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 PAX3P23760 479 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 CHRNA3P32297 505 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 BRCC3P46736 316 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 PLA2G4AP47712 749 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 CARSP49589 748 aaKnown RBP18.43■□□□□ 0.54
SSBP3-203ENST00000371319 ZNF143P52747 638 aaPredicted RBP18.43■□□□□ 0.54
SSBP3-203ENST00000371319 SNX16P57768 344 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 LLGL1Q15334 1064 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 TRADDQ15628 312 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 TCTN1Q2MV58 587 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 MDH1BQ5I0G3 518 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 GLB1LQ6UWU2 654 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 MAATS1Q7Z4T9 603 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 POLNQ7Z5Q5 900 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 ZDHHC17Q8IUH5 632 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 CCDC50Q8IVM0 306 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 MAGOHBQ96A72 148 aaKnown RBP18.43■□□□□ 0.54
SSBP3-203ENST00000371319 SLITRK1Q96PX8 696 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 RTP3Q9BQQ7 232 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 DUSP16Q9BY84 665 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 B3GNT5Q9BYG0 378 aa18.43■□□□□ 0.54
SSBP3-203ENST00000371319 DDX56Q9NY93 547 aaKnown RBP18.43■□□□□ 0.54
SSBP3-203ENST00000371319 PITPNM1O00562 1244 aa18.42■□□□□ 0.54
SSBP3-203ENST00000371319 XPO1O14980 1071 aaKnown RBP18.42■□□□□ 0.54
SSBP3-203ENST00000371319 B3GAT3O94766 335 aa18.42■□□□□ 0.54
SSBP3-203ENST00000371319 ODC1P11926 461 aa18.42■□□□□ 0.54
SSBP3-203ENST00000371319 IL1R2P27930 398 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms