RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 FAM200BP0CF97 657 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 CHRNB2P17787 502 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 MIPP30301 263 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 MLH1P40692 756 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 CAV1Q03135 178 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 TTC31Q49AM3 519 aaPredicted RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 MDH1BQ5I0G3 518 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 RAPH1Q70E73 1250 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 CCDC117Q8IWD4 279 aaPredicted RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 EFCAB13Q8IY85 973 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 AENQ8WTP8 325 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 EDEM1Q92611 657 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 PCYT2Q99447 389 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 CDC42EP4Q9H3Q1 356 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 XPO7Q9UIA9 1087 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 NUDT5Q9UKK9 219 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 TPX2Q9ULW0 747 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 C4AP0C0L4 1744 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 C2CD2LO14523 706 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 MAP2K7O14733 419 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 MMP3P08254 477 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 FLT3P36888 993 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 MDH1P40925 334 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 CTCFP49711 727 aaPredicted RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 RNF180Q86T96 592 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 SPATA2LQ8IUW3 424 aaPredicted RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 LRRC57Q8N9N7 239 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 EXD1Q8NHP7 514 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 JOSD2Q8TAC2 188 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 EIF2AQ9BY44 585 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 B3GNT5Q9BYG0 378 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 ZNF518BQ9C0D4 1074 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 CNOT10Q9H9A5 744 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 RSAD1Q9HA92 442 aa7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 PIH1D1Q9NWS0 290 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 DDX43Q9NXZ2 648 aaKnown RBP7.46□□□□□ -1.22
TGFBR3-202ENST00000370399 SLC15A5A6NIM6 579 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CHN1P15882 459 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 LSP1P33241 339 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 SHCBP1Q8NEM2 672 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 TFAP2BQ92481 460 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 RAPGEF5Q92565 580 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 PRMT1Q99873 361 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CNPY3Q9BT09 278 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 DDX23Q9BUQ8 820 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CYP3A43Q9HB55 503 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CACNG4Q9UBN1 327 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 TUBGCP4Q9UGJ1 667 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 NOCTQ9UK39 431 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CPSF3Q9UKF6 684 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 ITGA11Q9UKX5 1188 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 A0A087WUV0 522 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 DFFAO00273 331 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 LSM8O95777 96 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CYP1A2P05177 515 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 TROVE2P10155 538 aaKnown RBP eCLIP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 SCNN1GP51170 649 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 TPI1P60174 286 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 ADIGQ0VDE8 80 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 PTPN20Q4JDL3 420 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 BOLA3Q53S33 107 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 TAS1R3Q7RTX0 852 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 TMEM130Q8N3G9 435 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 DEPDC1BQ8WUY9 529 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 SCYL1Q96KG9 808 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 PITPNM3Q9BZ71 974 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 AVENQ9NQS1 362 aaPredicted RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 SLC38A7Q9NVC3 462 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.45□□□□□ -1.221e-6■■■□□ 14.7
TGFBR3-202ENST00000370399 CDY2AQ9Y6F7 541 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 PTPRJQ12913 1337 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 E2F8A0AVK6 867 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 SUN1O94901 812 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 VNN1O95497 513 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 EPHB2P29323 1055 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 ATICP31939 592 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 MCL1Q07820 350 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 ARHGAP1Q07960 439 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 WSCD1Q658N2 575 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 BZW1Q7L1Q6 419 aaKnown RBP7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 ZNF410Q86VK4 478 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 NLRP14Q86W24 1093 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CD302Q8IX05 232 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 DCLK2Q8N568 766 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 ATP11CQ8NB49 1132 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 C3orf20Q8ND61 904 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 URGCPQ8TCY9 931 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 PGBD4Q96DM1 585 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 BORCS6Q96GS4 357 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 DCTN4Q9UJW0 460 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 MYH11P35749 1972 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 PCSK1P29120 753 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 MMRN1Q13201 1228 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 SLC10A6Q3KNW5 377 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CHADLQ6NUI6 762 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 TMC3Q7Z5M5 1100 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.45□□□□□ -1.229e-7■■■■■ 54.9
TGFBR3-202ENST00000370399 VCPIP1Q96JH7 1222 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 PGLYRP2Q96PD5 576 aa7.45□□□□□ -1.22
TGFBR3-202ENST00000370399 CCT8L2Q96SF2 557 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms