RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PKN2Q16513 984 aaKnown RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 SEL1L2Q5TEA6 688 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 FBXO38Q6PIJ6 1188 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 DCLRE1AQ6PJP8 1040 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 EMC1Q8N766 993 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 ANKLE1Q8NAG6 615 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 PAWRQ96IZ0 340 aaKnown RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 SLC4A5Q9BY07 1137 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 MIS12Q9H081 205 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 KANSL3Q9P2N6 904 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 DNAJB4Q9UDY4 337 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 LCMT1Q9UIC8 334 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 PTPRDP23468 1912 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 LTBP2Q14767 1821 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 VWA8A3KMH1 1905 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 M0QZQ0 153 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 PARNO95453 639 aaKnown RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 GJC1P36383 396 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 OR1G1P47890 313 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 METTL23Q86XA0 190 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 COLGALT2Q8IYK4 626 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 SUSD3Q96L08 255 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 FAM193BQ96PV7 902 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 PNKPQ96T60 521 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 HNRNPABQ99729 332 aaKnown RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 MED10Q9BTT4 135 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 AP1M1Q9BXS5 423 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 PARD6BQ9BYG5 372 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 C11orf49Q9H6J7 331 aa17.71■□□□□ 0.43
PHGDH-202ENST00000369409 TTC7AQ9ULT0 858 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 PRG3Q9Y2Y8 225 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-202ENST00000369409 F8VP50 259 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 PSTPIP1O43586 416 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 CYP11A1P05108 521 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 PYGMP11217 842 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 PSMA2P25787 234 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 LONRF2Q1L5Z9 754 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 STK32AQ8WU08 396 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 RTP3Q9BQQ7 232 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 TMEM39AQ9NV64 488 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 TMEM59LQ9UK28 342 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 CDH9Q9ULB4 789 aa17.7■□□□□ 0.42
PHGDH-202ENST00000369409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
PHGDH-202ENST00000369409 KRIT1O00522 736 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 GABBR2O75899 941 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 CLTBP09497 229 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 TCF4P15884 667 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 PAX3P23760 479 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 PCSK1P29120 753 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 LRRC26Q2I0M4 334 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 CC2D1AQ6P1N0 951 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 PAQR9Q6ZVX9 377 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 ADAT2Q7Z6V5 191 aaKnown RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 TMEM110Q86TL2 294 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 NIPA2Q8N8Q9 360 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 CASD1Q96PB1 797 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 KRT82Q9NSB4 513 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 DSEQ9UL01 958 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 MYBPHLA2RUH7 354 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 PAPSS1O43252 624 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 HSPA1AP0DMV8 641 aaKnown RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 HSPA1BP0DMV9 641 aaKnown RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 NPR3P17342 541 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 PLA2G4AP47712 749 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 MRPS25P82663 173 aaKnown RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 CCDC70Q6NSX1 233 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 C8orf74Q6P047 294 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 OLFML1Q6UWY5 402 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 FAM35AQ86V20 835 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 FNIP1Q8TF40 1166 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 KRT12Q99456 494 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 NAP1L3Q99457 506 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-202ENST00000369409 LRRC1Q9BTT6 524 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 DUSP16Q9BY84 665 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 B3GNT5Q9BYG0 378 aa17.69■□□□□ 0.42
PHGDH-202ENST00000369409 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 ARHGEF37A1IGU5 675 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 TMEM189-UBE2V1I3L0A0 370 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 XPO1O14980 1071 aaKnown RBP17.68■□□□□ 0.42
PHGDH-202ENST00000369409 GRAP2O75791 330 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 H2AFXP16104 143 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-202ENST00000369409 CTCFP49711 727 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-202ENST00000369409 SNX16P57768 344 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 OVOS1Q6IE37 1185 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 FAM43BQ6ZT52 329 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-202ENST00000369409 NPAS4Q8IUM7 802 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 KLHL7Q8IXQ5 586 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 PCED1BQ96HM7 432 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 HCSTQ9UBK5 93 aa17.68■□□□□ 0.42
PHGDH-202ENST00000369409 HOXA2O43364 376 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 BEST1O76090 585 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 FAM200BP0CF97 657 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 LCP1P13796 627 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 SLC8A3P57103 927 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 SLC6A3Q01959 620 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms