RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PTP4A2Q12974 167 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CDC16Q13042 620 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CCDC142Q17RM4 750 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 WDR44Q5JSH3 913 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 HHIPL2Q6UWX4 724 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ULK2Q8IYT8 1036 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 RCOR2Q8IZ40 523 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CPXCR1Q8N123 301 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 FAM71DQ8N9W8 422 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ZNF398Q8TD17 642 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 RILPQ96NA2 401 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 FOXP3Q9BZS1 431 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 ACSS3Q9H6R3 686 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 MRPL47Q9HD33 250 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 XPO7Q9UIA9 1087 aaKnown RBP12.87□□□□□ -0.35
PHGDH-201ENST00000369407 TELO2Q9Y4R8 837 aa12.87□□□□□ -0.35
PHGDH-201ENST00000369407 CREB3O43889 395 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 CD48P09326 243 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 MYCLP12524 364 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 PHBP35232 272 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 RPL22P35268 128 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 LDHDQ86WU2 507 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 UNC45BQ8IWX7 931 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 KCTD17Q8N5Z5 321 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 POU5F2Q8N7G0 328 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ABTB1Q969K4 478 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 CCDC124Q96CT7 223 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 CFAP36Q96G28 342 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 PDP2Q9P2J9 529 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 SHOC2Q9UQ13 582 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 IKBKGQ9Y6K9 419 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 COL16A1Q07092 1604 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ASTN2O75129 1339 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 hCG_1818297A0A087WSY0 165 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ARHGAP42A6NI28 874 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 PRR5-ARHGAP8B1AHC4 643 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 FAM163BP0C2L3 166 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 EIF2AK2P19525 551 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ELK3P41970 407 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 NCKAP1LP55160 1127 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ARHGAP8P85298 464 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 TMPRSS15P98073 1019 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 GCNT1Q02742 428 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 DMP1Q13316 513 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 BMPR2Q13873 1038 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 SMAD1Q15797 465 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ACBD5Q5T8D3 534 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 TDRD10Q5VZ19 366 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 PLEKHA7Q6IQ23 1121 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 CEP128Q6ZU80 1094 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ABRAQ8N0Z2 381 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 SNRNP27Q8WVK2 155 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 TRIM11Q96F44 468 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 CSRNP1Q96S65 589 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 TRIM56Q9BRZ2 755 aaKnown RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 YIPF2Q9BWQ6 316 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 SPATA16Q9BXB7 569 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-201ENST00000369407 PREBQ9HCU5 417 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 ANGPTL2Q9UKU9 493 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 NRAPQ86VF7 1730 aa12.86□□□□□ -0.35
PHGDH-201ENST00000369407 TXNDC9O14530 226 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 TM9SF1O15321 606 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 CST8O60676 142 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 COQ9O75208 318 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 CIB2O75838 187 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 OATP04181 439 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 ETV4P43268 484 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 EPHB1P54762 984 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 AQP5P55064 265 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 ZBTB41Q5SVQ8 909 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 APLFQ8IW19 511 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 TRIM42Q8IWZ5 723 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 SMC1BQ8NDV3 1235 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 RSAD2Q8WXG1 361 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 NMD3Q96D46 503 aaKnown RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 MTBPQ96DY7 904 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 MFSD14AQ96MC6 490 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 EBF4Q9BQW3 602 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 GLIS2Q9BZE0 524 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 FARP1Q9Y4F1 1045 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 KBTBD13C9JR72 458 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 NLRP11P59045 1033 aaKnown RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 BST1Q10588 318 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 SPDYAQ5MJ70 313 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 PPM1NQ8N819 430 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 RIT2Q99578 217 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 C20orf27Q9GZN8 174 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 IQCGQ9H095 443 aaKnown RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 PARVAQ9NVD7 372 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 ETNK2Q9NVF9 386 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 DNAAF2Q9NVR5 837 aaKnown RBP12.85□□□□□ -0.35
PHGDH-201ENST00000369407 GALNT8Q9NY28 637 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 ZNRF3Q9ULT6 936 aa12.85□□□□□ -0.35
PHGDH-201ENST00000369407 EXOC7Q9UPT5 735 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms