RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 DUSP16Q9BY84 665 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 CYLDQ9NQC7 956 aa25.21■■□□□ 1.63
SNX3-203ENST00000368979 MYO1FO00160 1098 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 CLDN5O00501 218 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 PLA2G4AP47712 749 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 RGS7P49802 495 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 RPL7AP62424 266 aaKnown RBP25.2■■□□□ 1.62
SNX3-203ENST00000368979 COG1Q8WTW3 980 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 PSMB7Q99436 277 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 SELENOOQ9BVL4 669 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 CWH43Q9H720 699 aa25.2■■□□□ 1.62
SNX3-203ENST00000368979 SIGLEC16A6NMB1 481 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 XPO1O14980 1071 aaKnown RBP25.19■■□□□ 1.62
SNX3-203ENST00000368979 ZNF185O15231 689 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 DDX3YO15523 660 aaKnown RBP25.19■■□□□ 1.62
SNX3-203ENST00000368979 GABBR2O75899 941 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 PROSCO94903 275 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 OAZ2O95190 189 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 NPR3P17342 541 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 TERF1P54274 439 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 PPIGQ13427 754 aaKnown RBP eCLIP25.19■■□□□ 1.62
SNX3-203ENST00000368979 FAM35AQ86V20 835 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 CD101Q93033 1021 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 MCEEQ96PE7 176 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 MED10Q9BTT4 135 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 CARD6Q9BX69 1037 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 PRKAG2Q9UGJ0 569 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 LCMT1Q9UIC8 334 aa25.19■■□□□ 1.62
SNX3-203ENST00000368979 PTPRSQ13332 1948 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 GOLGA8SH3BPF8 625 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 CES2O00748 559 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 CXCR5P32302 372 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 BCAR1P56945 870 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 CLEC20AQ6ZU45 233 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 FAM183BPQ6ZVS7 135 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 C16orf59Q7L2K0 433 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 CPNE8Q86YQ8 564 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 MYLPFQ96A32 169 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 HSFY1Q96LI6 401 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 TMEM209Q96SK2 561 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 GPR62Q9BZJ7 368 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 KRT82Q9NSB4 513 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 SF3B1O75533 1304 aaKnown RBP eCLIP25.18■■□□□ 1.622e-7■■■■■ 41.4
SNX3-203ENST00000368979 VWA8A3KMH1 1905 aa25.18■■□□□ 1.62
SNX3-203ENST00000368979 MIF4GDA9UHW6 222 aaKnown RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 FAM200BP0CF97 657 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 KRT3P12035 628 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 FGFR3P22607 806 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 MAN1A1P33908 653 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 SLC1A1P43005 524 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 DNA2P51530 1060 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 SNX16P57768 344 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 FUT10Q6P4F1 479 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 DCUN1D2Q6PH85 259 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 TMCO2Q7Z6W1 182 aaPredicted RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 TMEM173Q86WV6 379 aaPredicted RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 CREG2Q8IUH2 290 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 METTL5Q9NRN9 209 aaKnown RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 IP6K2Q9UHH9 426 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 NLRC5Q86WI3 1866 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 CCDC85CA6NKD9 419 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 NT5C1B-RDH14C9J2C7 533 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 PIK3R2O00459 728 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 BEST1O76090 585 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 PBX3P40426 434 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 ACADSBP45954 432 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 SLC8A3P57103 927 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 TSPY1Q01534 308 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 OGDHQ02218 1023 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 ZNF252P-AS1Q0IIN9 211 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 ELAVL2Q12926 359 aaKnown RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 MRPL58Q14197 206 aaKnown RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 VARS2Q5ST30 1063 aaKnown RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 FAM171A1Q5VUB5 890 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 OR6B2Q6IFH4 312 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 OLFML1Q6UWY5 402 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 LRRTM3Q86VH5 581 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 CEP112Q8N8E3 955 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 LRRN4CLQ8ND94 238 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 JOSD2Q8TAC2 188 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 BCL7CQ8WUZ0 217 aaPredicted RBP25.17■■□□□ 1.62
SNX3-203ENST00000368979 BADQ92934 168 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 CAPZA3Q96KX2 299 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 TMLHEQ9NVH6 421 aa25.17■■□□□ 1.62
SNX3-203ENST00000368979 KCNK3O14649 394 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 PAPSS1O43252 624 aaPredicted RBP25.16■■□□□ 1.62
SNX3-203ENST00000368979 SPOPO43791 374 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 EFEMP2O95967 443 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 CTNNA2P26232 953 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 GTF2F1P35269 517 aaKnown RBP eCLIP25.16■■□□□ 1.62
SNX3-203ENST00000368979 FPGSQ05932 587 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 MAPRE1Q15691 268 aaKnown RBP25.16■■□□□ 1.62
SNX3-203ENST00000368979 FAM102AQ5T9C2 384 aaPredicted RBP25.16■■□□□ 1.62
SNX3-203ENST00000368979 OTOP2Q7RTS6 562 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 PIGZQ86VD9 579 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 ZDHHC17Q8IUH5 632 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 CMTR2Q8IYT2 770 aaKnown RBP25.16■■□□□ 1.62
SNX3-203ENST00000368979 FNIP1Q8TF40 1166 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 KCTD13Q8WZ19 329 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 SMARCD1Q96GM5 515 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms