RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 RNF8O76064 485 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 ATICP31939 592 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 STIP1P31948 543 aaKnown RBP14.98□□□□□ -0.01
CD48-201ENST00000368045 PCK1P35558 622 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 SLC26A2P50443 739 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 RASSF2P50749 326 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 RAD23BP54727 409 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
CD48-201ENST00000368045 RHPN2Q8IUC4 686 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 ANKMY2Q8IV38 441 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 KIF2BQ8N4N8 673 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.98□□□□□ -0.01
CD48-201ENST00000368045 C10orf82Q8WW14 230 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 ZNF75CPQ92670 426 aaPredicted RBP14.98□□□□□ -0.01
CD48-201ENST00000368045 TBC1D31Q96DN5 1066 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 GPR20Q99678 358 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 MAK16Q9BXY0 300 aaKnown RBP14.98□□□□□ -0.01
CD48-201ENST00000368045 MIS12Q9H081 205 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 SYNCQ9H7C4 482 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 RPF1Q9H9Y2 349 aaKnown RBP14.98□□□□□ -0.01
CD48-201ENST00000368045 RSAD1Q9HA92 442 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 KIF9Q9HAQ2 790 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 ETNK1Q9HBU6 452 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 CYLDQ9NQC7 956 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 ASNSD1Q9NWL6 643 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 CHKBQ9Y259 395 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 TNFSF13BQ9Y275 285 aa14.98□□□□□ -0.01
CD48-201ENST00000368045 A0A1W2PPM1 405 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 ZBTB42B2RXF5 422 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 TROVE2P10155 538 aaKnown RBP eCLIP14.97□□□□□ -0.01
CD48-201ENST00000368045 KRT4P19013 534 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 EIF3EP60228 445 aaKnown RBP14.97□□□□□ -0.01
CD48-201ENST00000368045 DYNLT1P63172 113 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 SLC45A4Q5BKX6 768 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 FAM47CQ5HY64 1035 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 HP1BP3Q5SSJ5 553 aaPredicted RBP14.97□□□□□ -0.01
CD48-201ENST00000368045 FNBP1LQ5T0N5 605 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 ANKRD22Q5VYY1 191 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 LVRNQ6Q4G3 990 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 C3orf62Q6ZUJ4 267 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 RFX6Q8HWS3 928 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 SLC4A11Q8NBS3 891 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 KCTD6Q8NC69 237 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 ERP27Q96DN0 273 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 RSRC1Q96IZ7 334 aaKnown RBP14.97□□□□□ -0.01
CD48-201ENST00000368045 ANKRD27Q96NW4 1050 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 CYTH2Q99418 400 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 PAFAH2Q99487 392 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 FRMD8Q9BZ67 464 aaPredicted RBP14.97□□□□□ -0.01
CD48-201ENST00000368045 VPS11Q9H270 941 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 VRTNQ9H8Y1 702 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 NXF1Q9UBU9 619 aaKnown RBP14.97□□□□□ -0.01
CD48-201ENST00000368045 CYTH4Q9UIA0 394 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 GRID1Q9ULK0 1009 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 POLIQ9UNA4 740 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 RPL26L1Q9UNX3 145 aaKnown RBP14.97□□□□□ -0.01
CD48-201ENST00000368045 C15orf41Q9Y2V0 281 aa14.97□□□□□ -0.01
CD48-201ENST00000368045 C2CD2LO14523 706 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 TRAFD1O14545 582 aaPredicted RBP14.96□□□□□ -0.01
CD48-201ENST00000368045 TRUB2O95900 331 aaKnown RBP14.96□□□□□ -0.01
CD48-201ENST00000368045 HMGCRP04035 888 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 P4HA1P13674 534 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 GDF10P55107 478 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 PTPN11Q06124 597 aaPredicted RBP14.96□□□□□ -0.01
CD48-201ENST00000368045 TFDP2Q14188 446 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 SEPT7Q16181 437 aaKnown RBP14.96□□□□□ -0.01
CD48-201ENST00000368045 SMTNL2Q2TAL5 461 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 CELF3Q5SZQ8 465 aaKnown RBP14.96□□□□□ -0.01
CD48-201ENST00000368045 PRAMEF18Q5VWM3 479 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 CAPN12Q6ZSI9 719 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 PALM2Q8IXS6 379 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 TTC39CQ8N584 583 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 BANPQ8N9N5 519 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 FBXO36Q8NEA4 188 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 MZB1Q8WU39 189 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 DCAKDQ8WVC6 231 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 STAMBPL1Q96FJ0 436 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 CPXM1Q96SM3 734 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 NFKBIZQ9BYH8 718 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 SPATC1LQ9H0A9 340 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 CDT1Q9H211 546 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 SLCO1B3Q9NPD5 702 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 SAR1AQ9NR31 198 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 METTL5Q9NRN9 209 aaKnown RBP14.96□□□□□ -0.01
CD48-201ENST00000368045 BTBD7Q9P203 1132 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 XPO7Q9UIA9 1087 aaKnown RBP14.96□□□□□ -0.01
CD48-201ENST00000368045 SIX4Q9UIU6 781 aa14.96□□□□□ -0.01
CD48-201ENST00000368045 GOLGA8MH3BSY2 632 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 ANP32DO95626 131 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 ERBB2P04626 1255 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 MIPP30301 263 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 ROR1Q01973 937 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 TNFAIP2Q03169 654 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 POU5F1BQ06416 359 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 DPYSL3Q14195 570 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 MSS51Q4VC12 460 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 OTOAQ7RTW8 1153 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 KIAA0319LQ8IZA0 1049 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 SPOCK2Q92563 424 aa14.96□□□□□ -0.02
CD48-201ENST00000368045 N4BP2L2Q92802 583 aaPredicted RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms