RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 EPN2O95208 641 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 F11P03951 625 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 CKMP06732 381 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 KRT19P08727 400 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 IFNAR2P48551 515 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 LHX1P48742 406 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
MRPL55-209ENST00000366735 MYO1EQ12965 1108 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 NR1H3Q13133 447 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 MTF1Q14872 753 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 STK38Q15208 465 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 WDR44Q5JSH3 913 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 STXBP4Q6ZWJ1 553 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 LRRTM3Q86VH5 581 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 MON1AQ86VX9 555 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-209ENST00000366735 PDCL2Q8N4E4 241 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 USP13Q92995 863 aaPredicted RBP13.3□□□□□ -0.28
MRPL55-209ENST00000366735 FUBP3Q96I24 572 aaKnown RBP eCLIP13.3□□□□□ -0.28
MRPL55-209ENST00000366735 ANKRD36BP1Q96IX9 119 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 HPS4Q9NQG7 708 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 OLFML3Q9NRN5 406 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 AGAP1Q9UPQ3 857 aa13.3□□□□□ -0.28
MRPL55-209ENST00000366735 SPTBN2O15020 2390 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 EXTL3O43909 919 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 RNF40O75150 1001 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 NOL4O94818 638 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 HMGA1P17096 107 aaKnown RBP13.29□□□□□ -0.28
MRPL55-209ENST00000366735 GRIN1Q05586 938 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 KCNB1Q14721 858 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 MAPRE1Q15691 268 aaKnown RBP13.29□□□□□ -0.28
MRPL55-209ENST00000366735 ELF2Q15723 593 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 CFAP221Q4G0U5 840 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 TXNDC8Q6A555 127 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 TRIM68Q6AZZ1 485 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 FSTL4Q6MZW2 842 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 CAVIN1Q6NZI2 390 aaKnown RBP13.29□□□□□ -0.28
MRPL55-209ENST00000366735 CRELD2Q6UXH1 353 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-209ENST00000366735 CCDC73Q6ZRK6 1079 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 C11orf74Q86VG3 221 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 ADGRF2Q8IZF7 708 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 TOP6BLQ8N6T0 577 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 NOC3LQ8WTT2 800 aaKnown RBP13.29□□□□□ -0.28
MRPL55-209ENST00000366735 CCDC97Q96F63 343 aaPredicted RBP13.29□□□□□ -0.28
MRPL55-209ENST00000366735 POM121Q96HA1 1249 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 P2RY13Q9BPV8 354 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 ARRDC1-AS1Q9H2J1 176 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 TRPC7Q9HCX4 862 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 L1RE1Q9UN81 338 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 CCL26Q9Y258 94 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 CEP192Q8TEP8 1941 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 PLXND1Q9Y4D7 1925 aa13.29□□□□□ -0.28
MRPL55-209ENST00000366735 AXIN1O15169 862 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 ZNF806P0C7X5 589 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 IDEP14735 1019 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 PFKLP17858 780 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 ADSSP30520 456 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 STAT6P42226 847 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 ME1P48163 572 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 RBP5P82980 135 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 USP4Q13107 963 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 SURF1Q15526 300 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 TMEM150AQ86TG1 271 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 CSGALNACT2Q8N6G5 542 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 C1orf127Q8N9H9 656 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 OSCP1Q8WVF1 389 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 CD101Q93033 1021 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 SAAL1Q96ER3 474 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 EPSTI1Q96J88 318 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 MYRFLQ96LU7 910 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 CEP295NLQ96MC4 621 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 DUS2Q9NX74 493 aaKnown RBP13.28□□□□□ -0.28
MRPL55-209ENST00000366735 GDAP2Q9NXN4 497 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 TMEM63CQ9P1W3 806 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 PCDHA7Q9UN72 937 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 SNX9Q9Y5X1 595 aa13.28□□□□□ -0.28
MRPL55-209ENST00000366735 SDK1Q7Z5N4 2213 aa13.27□□□□□ -0.28
MRPL55-209ENST00000366735 TPRP12270 2363 aaKnown RBP13.27□□□□□ -0.29
MRPL55-209ENST00000366735 RHOBTB1O94844 696 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 NFATC1O95644 943 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 APBB3O95704 486 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 EGFP01133 1207 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 TNNC2P02585 160 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 ANXA13P27216 316 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 GJA4P35212 333 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 MPLP40238 635 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 MAGEA11P43364 429 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 RAP1GAPP47736 663 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 GPR15P49685 360 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 CDR1P51861 262 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 ZNF445P59923 1031 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 PSMD2Q13200 908 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 ZNF77Q15935 545 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 ST3GAL2Q16842 350 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.29
MRPL55-209ENST00000366735 SYT13Q7L8C5 426 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms