RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 DDX27Q96GQ7 796 aaKnown RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 RILPQ96NA2 401 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 GMLQ99445 158 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 TARS2Q9BW92 718 aaKnown RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 SMYD3Q9H7B4 428 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 CLIC5Q9NZA1 410 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 PSMC3IPQ9P2W1 217 aaPredicted RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 PRPF4O43172 522 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 HNRNPRO43390 633 aaKnown RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 UNGP13051 313 aaPredicted RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 AP2B1P63010 937 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 PRKCEQ02156 737 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 CXCL9Q07325 125 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 EFTUD2Q15029 972 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 WDR44Q5JSH3 913 aa20.57■□□□□ 0.88
TRIM58-201ENST00000366481 CDR2LQ86X02 465 aaPredicted RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 MARCOQ9UEW3 520 aaPredicted RBP20.57■□□□□ 0.88
TRIM58-201ENST00000366481 SNRNP48Q6IEG0 339 aaKnown RBP20.56■□□□□ 0.88
TRIM58-201ENST00000366481 OR5B17Q8NGF7 314 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 TTC25Q96NG3 672 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 CHMP2BQ9UQN3 213 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 TTLL13PA6NNM8 815 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 FCHO1O14526 889 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 TLR3O15455 904 aaKnown RBP20.56■□□□□ 0.88
TRIM58-201ENST00000366481 SSTR1P30872 391 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 SCARA5Q6ZMJ2 495 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 ZBTB33Q86T24 672 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 IWS1Q96ST2 819 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 HAPLN2Q9GZV7 340 aa20.56■□□□□ 0.88
TRIM58-201ENST00000366481 ZNF541Q9H0D2 1346 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 SGK1O00141 431 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 ANPEPP15144 967 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 CENPUQ71F23 418 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.55■□□□□ 0.88
TRIM58-201ENST00000366481 PYROXD1Q8WU10 500 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 IFT43Q96FT9 208 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 ETNK2Q9NVF9 386 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 RGS20O76081 388 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 MTA2O94776 668 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 GNA15P30679 374 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 RASA2Q15283 850 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 EEPD1Q7L9B9 569 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 ZCCHC9Q8N567 271 aaKnown RBP20.55■□□□□ 0.88
TRIM58-201ENST00000366481 ATXN10Q9UBB4 475 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 MT-ND3P03897 115 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 ORC1Q13415 861 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 ALYREFQ86V81 257 aaKnown RBP20.55■□□□□ 0.88
TRIM58-201ENST00000366481 PALM2Q8IXS6 379 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 SMC1BQ8NDV3 1235 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 MFSD14AQ96MC6 490 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 ECSITQ9BQ95 431 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 DNPEPQ9ULA0 475 aa20.55■□□□□ 0.88
TRIM58-201ENST00000366481 FAM237BA0A1B0GVD1 139 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 STK10O94804 968 aaKnown RBP20.54■□□□□ 0.88
TRIM58-201ENST00000366481 FAM200BP0CF97 657 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 FDX1P10109 184 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 BGNP21810 368 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 HMGCS2P54868 508 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 OSTNP61366 133 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 USP46P62068 366 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 SCUBE1Q8IWY4 988 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 MTBPQ96DY7 904 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 FAM111AQ96PZ2 611 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 COQ4Q9Y3A0 265 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 LPXNO60711 386 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 EDN1P05305 212 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 KRT76Q01546 638 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 TFDP1Q14186 410 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 CTC1Q2NKJ3 1217 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 RIPOR1Q6ZS17 1223 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 RGS9BPQ6ZS82 235 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 NIM1KQ8IY84 436 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 SLCO2A1Q92959 643 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 TLE6Q9H808 572 aa20.54■□□□□ 0.88
TRIM58-201ENST00000366481 MTO1Q9Y2Z2 717 aaKnown RBP20.54■□□□□ 0.88
TRIM58-201ENST00000366481 F8VP50 259 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 CYP1A1P04798 512 aaPredicted RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 JAK3P52333 1124 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 GAD2Q05329 585 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 SMTNL2Q2TAL5 461 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 CYP4A22Q5TCH4 519 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 SPATA24Q86W54 205 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 JDP2Q8WYK2 163 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 CCDC124Q96CT7 223 aaKnown RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 MPP4Q96JB8 637 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 TCHPQ9BT92 498 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 NMUR2Q9GZQ4 415 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 ZWILCHQ9H900 591 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 GINM1Q9NU53 330 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 FBXO40Q9UH90 709 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 AGO2Q9UKV8 859 aaKnown RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 NUB1Q9Y5A7 615 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 WDR46O15213 610 aaKnown RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 VNN1O95497 513 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 ARL4CP56559 192 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 CDK16Q00536 496 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 MED21Q13503 144 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 GSTA3Q16772 222 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 BBS9Q3SYG4 887 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms