RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MAPRE1Q15691 268 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 WDR72Q3MJ13 1102 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TDRD10Q5VZ19 366 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ZC3H14Q6PJT7 736 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 VSTM1Q6UX27 236 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 C4orf50Q6ZRC1 276 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 RALGPS2Q86X27 583 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ADSSL1Q8N142 457 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SUMF1Q8NBK3 374 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MYCBPAPQ8TBZ2 947 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CSGALNACT1Q8TDX6 532 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MYLPFQ96A32 169 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CHFRQ96EP1 664 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MMS19Q96T76 1030 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 IER2Q9BTL4 223 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SCAND2PQ9GZW5 306 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GOLPH3LQ9H4A5 285 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TDP1Q9NUW8 608 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 EXOC1Q9NV70 894 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MAGEC2Q9UBF1 373 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 UXTQ9UBK9 157 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TRAF3IP3Q9Y228 551 aa14.62□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SPTBN4Q9H254 2564 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ANAPC1Q9H1A4 1944 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 VNN1O95497 513 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CTHP32929 405 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 AVPR1AP37288 418 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 AP3M2P53677 418 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MCCD1P59942 119 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DLG4P78352 724 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CSTF1Q05048 431 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TNK2Q07912 1038 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 C1orf220Q5T0J3 134 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MRPS31Q92665 395 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PCED1BQ96HM7 432 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SLC22A12Q96S37 553 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TTLL2Q9BWV7 592 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 KIF9Q9HAQ2 790 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 HPS4Q9NQG7 708 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GKN1Q9NS71 199 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 GCNT4Q9P109 453 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MAGED2Q9UNF1 606 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PCDHGA2Q9Y5H1 932 aa14.61□□□□□ -0.07
TNFRSF1A-202ENST00000366159 OTOGLQ3ZCN5 2332 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 OTOL1A6NHN0 477 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 NR3C1P04150 777 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 PTPN1P18031 435 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 BDNFP23560 247 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 USP46P62068 366 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CCINQ13939 588 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 NFIL3Q16649 462 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 KRBA2Q6ZNG9 492 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SCN4BQ8IWT1 228 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SYAP1Q96A49 352 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 C8orf48Q96LL4 319 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CYP2S1Q96SQ9 504 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DPEP3Q9H4B8 488 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TMEM30AQ9NV96 361 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 THG1LQ9NWX6 298 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ZSCAN32Q9NX65 697 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ATP6V1DQ9Y5K8 247 aa14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 EP300Q09472 2414 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-202ENST00000366159 MAPK13O15264 365 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TCF3P15923 654 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 KPNA1P52294 538 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 CACNA2D1P54289 1103 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TNNC1P63316 161 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 NOP14P78316 857 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TRPC3Q13507 836 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 KCNB1Q14721 858 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ITPRIPL2Q3MIP1 535 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 ZACNQ401N2 412 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TSSK4Q6SA08 328 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 OR6B3Q8NGW1 331 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TTC8Q8TAM2 541 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 TMC2Q8TDI7 906 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 FAM126AQ9BYI3 521 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 SNX25Q9H3E2 840 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 RTN4Q9NQC3 1192 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 DNAH14Q0VDD8 3507 aa14.59□□□□□ -0.07
TNFRSF1A-202ENST00000366159 C2orf78A6NCI8 922 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 IKBKBO14920 756 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ZNF202O95125 648 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 PAPSS2O95340 614 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 CDH8P55286 799 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ZXDBP98169 803 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 CYP27A1Q02318 531 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 FAM160A1Q05DH4 1040 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 RUNX3Q13761 415 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 NCOA4Q13772 614 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ZNF77Q15935 545 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 DGKKQ5KSL6 1271 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 TRIM68Q6AZZ1 485 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 DENND5BQ6ZUT9 1274 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 PAQR9Q6ZVX9 377 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 SPEM1Q8N4L4 309 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 FSIP1Q8NA03 581 aa14.58□□□□□ -0.08
TNFRSF1A-202ENST00000366159 B3GALNT2Q8NCR0 500 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms