RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 TRILQ7L0X0 811 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 C16orf82Q7Z2V1 217 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 TMPRSS9Q7Z410 1059 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 RSPH3Q86UC2 560 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 LIX1LQ8IVB5 337 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 RTP4Q96DX8 246 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 CYYR1Q96J86 154 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 TRIB1Q96RU8 372 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 ELF4Q99607 663 aaPredicted RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 EGFL8Q99944 293 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 SLC25A33Q9BSK2 321 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 SPATA9Q9BWV2 254 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 C1QTNF4Q9BXJ3 329 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 BARHL1Q9BZE3 327 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 AMBRA1Q9C0C7 1298 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 TINAGL1Q9GZM7 467 aaPredicted RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 CAPN10Q9HC96 672 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 FZD3Q9NPG1 666 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 SCRT2Q9NQ03 307 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 SLC23A1Q9UHI7 598 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 KCNG1Q9UIX4 513 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 MSRAQ9UJ68 235 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 ANAPC4Q9UJX5 808 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 AJAP1Q9UKB5 411 aaPredicted RBP0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 NTNG1Q9Y2I2 539 aa0.43□□□□□ -2.34
RNU6-54P-201ENST00000365563 TTBK1Q5TCY1 1321 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 KMT2DO14686 5537 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 RPS10-NUDT3A0A1W2PQS6 291 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TCRBV7S2A1N4TA0A589 114 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 F8W810 466 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TPP1O14773 563 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 KCNQ3O43525 872 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 AKAP10O43572 662 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 GPR32O75388 356 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 AGFG2O95081 481 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 PRKCBP05771 671 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 IL6RP08887 468 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 FCGR1AP12314 374 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 ADSLP30566 484 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 ALDH5A1P51649 535 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 CLCN5P51795 746 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 SEC61A1P61619 476 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 ROR2Q01974 943 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 EEF1A2Q05639 463 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 CRYZQ08257 329 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 LRMPQ12912 555 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TRAF2Q12933 501 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 DMP1Q13316 513 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 DDR2Q16832 855 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TCTE1Q5JU00 501 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 DACT2Q5SW24 774 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TREML2Q5T2D2 321 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 L1TD1Q5T7N2 865 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 DENND2CQ68D51 928 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 SFRP4Q6FHJ7 346 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 ABLIM2Q6H8Q1 611 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TMEM65Q6PI78 240 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 VSTM1Q6UX27 236 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 C15orf39Q6ZRI6 1047 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 FAM83HQ6ZRV2 1179 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 Q6ZWC4 215 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 CFAP52Q8N1V2 620 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 SLC44A5Q8NCS7 719 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 MAPK1IP1LQ8NDC0 245 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 GSTCDQ8NEC7 633 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 GPR156Q8NFN8 814 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 PJA1Q8NG27 643 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 PNISRQ8TF01 805 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 RIN2Q8WYP3 895 aaPredicted RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 CYFIP2Q96F07 1278 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 IGSF21Q96ID5 467 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 ZNF347Q96SE7 839 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 ACO2Q99798 780 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TRMT61BQ9BVS5 477 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 PACSIN1Q9BY11 444 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 ZMAT4Q9H898 229 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 SLC52A2Q9HAB3 445 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 GLOD4Q9HC38 313 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TMEM45AQ9NWC5 275 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 TMEM248Q9NWD8 314 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 PCDHA12Q9UN75 941 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 RUVBL1Q9Y265 456 aaKnown RBP0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 MRVI1Q9Y6F6 885 aa0.42□□□□□ -2.34
RNU6-54P-201ENST00000365563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 TCRBV5S1A1TA0A578 114 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 TCRBV16S1A1N1A0A5B0 115 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 PRSS38A1L453 326 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 MEIOCA2RUB1 952 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 FAM72CH0Y354 149 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 H0YGN5 161 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 POLRMTO00411 1230 aaKnown RBP0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 TLX3O43711 291 aaPredicted RBP0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 LMX1BO60663 402 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 CRLF1O75462 422 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 PPP1R3DO95685 299 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 ANXA1P04083 346 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 MTHFD1P11586 935 aaKnown RBP0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 MYCLP12524 364 aaPredicted RBP0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 TACR3P29371 465 aa0.41□□□□□ -2.34
RNU6-54P-201ENST00000365563 LIPAP38571 399 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms