RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 ADGRF2Q8IZF7 708 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SYCP3Q8IZU3 236 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 KIF2BQ8N4N8 673 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 PLD5Q8N7P1 536 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 CCDC89Q8N998 374 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 RNF169Q8NCN4 708 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 PHC3Q8NDX5 983 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 FAM13CQ8NE31 585 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 MCUQ8NE86 351 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 CHST13Q8NET6 341 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 RFWD2Q8NHY2 731 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 FBXO27Q8NI29 283 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 PCDH19Q8TAB3 1148 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ACTL9Q8TC94 416 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZNF398Q8TD17 642 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SLC35F5Q8WV83 523 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 AFG1LQ8WV93 481 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 WDR60Q8WVS4 1066 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 MAIP1Q8WWC4 291 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SLC44A1Q8WWI5 657 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 PRPF31Q8WWY3 499 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 CNKSR2Q8WXI2 1034 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SLC7A3Q8WY07 619 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZNF75CPQ92670 426 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 INPP5DQ92835 1189 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 GATA6Q92908 595 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 AZIN2Q96A70 460 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 EMID1Q96A84 441 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 MIEF2Q96C03 454 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ACSF2Q96CM8 615 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 GRAMD1AQ96CP6 724 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZBTB10Q96DT7 871 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TRIM11Q96F44 468 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 STAMBPL1Q96FJ0 436 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZMAT2Q96NC0 199 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 RNF157Q96PX1 679 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 RBM15Q96T37 977 aaKnown RBP eCLIP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 C11orf70Q9BRQ4 267 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TRIM56Q9BRZ2 755 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TACO1Q9BSH4 297 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 C16orf70Q9BSU1 422 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TMEM121Q9BTD3 319 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 CCDC106Q9BWC9 280 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TBC1D10AQ9BXI6 508 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 HEMGNQ9BXL5 484 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TEX13BQ9BXU2 312 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 CADM1Q9BY67 442 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 FRMD8P1Q9BZ68 369 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 IMPG2Q9BZV3 1241 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 NIF3L1Q9GZT8 377 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 KLC2Q9H0B6 622 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ASCC2Q9H1I8 757 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 CDT1Q9H211 546 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 VPS11Q9H270 941 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ADAMTS10Q9H324 1103 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 RNPEPQ9H4A4 650 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TRABDQ9H4I3 376 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 DENND2DQ9H6A0 471 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZNF385DQ9H6B1 395 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ACAD9Q9H845 621 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZNF395Q9H8N7 513 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 EHMT1Q9H9B1 1298 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 UGT1A7Q9HAW7 530 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 UGT1A10Q9HAW8 530 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 UGT1A8Q9HAW9 530 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 PRDM16Q9HAZ2 1276 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 VEZTQ9HBM0 779 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 POPDC2Q9HBU9 364 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 MLXIPLQ9NP71 852 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 UTP3Q9NQZ2 479 aaKnown RBP eCLIP1.84□□□□□ -2.115e-28■■■■□ 23
SNORD48-201ENST00000364953 ZNF302Q9NR11 478 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SAR1AQ9NR31 198 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 KRT82Q9NSB4 513 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 HOMER3Q9NSC5 361 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 CISHQ9NSE2 258 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 INTS9Q9NV88 658 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 PARVAQ9NVD7 372 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 DNAJC17Q9NVM6 304 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 KLHL11Q9NVR0 708 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 DDX43Q9NXZ2 648 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 STK32BQ9NY57 414 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 TAS2R1Q9NYW7 299 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 RBAKQ9NYW8 714 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 KLHL14Q9P2G3 628 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SLC17A7Q9P2U7 560 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZNF219Q9P2Y4 722 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SAE1Q9UBE0 346 aaPredicted RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 HESX1Q9UBX0 185 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 MTRF1LQ9UGC7 380 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 IP6K2Q9UHH9 426 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 GGT7Q9UJ14 662 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ZNF180Q9UJW8 692 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 ANAPC5Q9UJX4 755 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 MTUS1Q9ULD2 1270 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 STRIP2Q9ULQ0 834 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 RPL26L1Q9UNX3 145 aaKnown RBP1.84□□□□□ -2.11
SNORD48-201ENST00000364953 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.84□□□□□ -2.113e-29■□□□□ 11.2
SNORD48-201ENST00000364953 KCNH4Q9UQ05 1017 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 SHOC2Q9UQ13 582 aa1.84□□□□□ -2.11
SNORD48-201ENST00000364953 NEU3Q9UQ49 428 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms