RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 MPP2Q14168 576 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 MAPK6Q16659 721 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
EPHB4-202ENST00000360620 EEPD1Q7L9B9 569 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 SLC26A11Q86WA9 606 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 AFAP1L2Q8N4X5 818 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 EMC1Q8N766 993 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 ZNF398Q8TD17 642 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 ATXN7L3BQ96GX2 97 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 C12orf65Q9H3J6 166 aaKnown RBP12.51□□□□□ -0.41
EPHB4-202ENST00000360620 ARL8BQ9NVJ2 186 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 ZNF212Q9UDV6 495 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 TAGLN3Q9UI15 199 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 RPL26L1Q9UNX3 145 aaKnown RBP12.51□□□□□ -0.41
EPHB4-202ENST00000360620 FIS1Q9Y3D6 152 aa12.51□□□□□ -0.41
EPHB4-202ENST00000360620 KLHL2O95198 593 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 VIL1P09327 827 aaKnown RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ARL1P40616 181 aaPredicted RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ARL4AP40617 200 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 PSEN1P49768 467 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 SESN2P58004 480 aaPredicted RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 DEUP1Q05D60 604 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 KHDC1Q4VXA5 237 aaKnown RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 RSPH3Q86UC2 560 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 C4orf19Q8IY42 314 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ASAP3Q8TDY4 903 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 NSUN6Q8TEA1 469 aaKnown RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 LENG9Q96B70 501 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 SRPK1Q96SB4 655 aaKnown RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 PAK5Q9P286 719 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 FAM237BA0A1B0GVD1 139 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 KBTBD13C9JR72 458 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 PEX11AO75192 247 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 GPC4O75487 556 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 GRAP2O75791 330 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ATP6V1B1P15313 513 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 PDGFRAP16234 1089 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 GCLCP48506 637 aaPredicted RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 RPL7AP62424 266 aaKnown RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 GTF2BQ00403 316 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 APOPT1Q96IL0 206 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 RSAD1Q9HA92 442 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ANLNQ9NQW6 1124 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 MTA2O94776 668 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ALADP13716 330 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 GLRA2P23416 452 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 SDC4P31431 198 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 PDE1CQ14123 709 aaPredicted RBP12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ZNF568Q3ZCX4 644 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 ANKRD20A4Q4UJ75 823 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 FAM160B1Q5W0V3 765 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 MAP4K3Q8IVH8 894 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 B4GALNT2Q8NHY0 566 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 RFWD2Q8NHY2 731 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 VCPIP1Q96JH7 1222 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 TXLNGYQ9BZA5 131 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 NIF3L1Q9GZT8 377 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 SLC17A7Q9P2U7 560 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 TLK1Q9UKI8 766 aa12.5□□□□□ -0.41
EPHB4-202ENST00000360620 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 RGL2O15211 777 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 NR3C2P08235 984 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 STIP1P31948 543 aaKnown RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 MMP14P50281 582 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 ATXN3P54252 364 aaPredicted RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 IGBP1P78318 339 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 TNFAIP1Q13829 316 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 SEPT6Q14141 434 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 KBTBD12Q3ZCT8 623 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 XKR3Q5GH77 459 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 HEATR6Q6AI08 1181 aaKnown RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 SNRNP48Q6IEG0 339 aaKnown RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 DSTYKQ6XUX3 929 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 TTC16Q8NEE8 873 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 FAXDC2Q96IV6 333 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 PPP1R36Q96LQ0 422 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 MBOAT7Q96N66 472 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 MYH3P11055 1940 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 E2F8A0AVK6 867 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 ARHGAP10A1A4S6 786 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 ALOX15BO15296 676 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 GSC2O15499 205 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 PRPF4O43172 522 aaKnown RBP eCLIP12.49□□□□□ -0.416e-7■■■■□ 23.2
EPHB4-202ENST00000360620 ZBTB7AO95365 584 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 TPD52P55327 224 aaPredicted RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 EMC2Q15006 297 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 EFTUD2Q15029 972 aaKnown RBP eCLIP12.49□□□□□ -0.414e-7■■■■□ 19.5
EPHB4-202ENST00000360620 OLFML2BQ68BL8 750 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 ALLCQ8N6M5 410 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 POU5F2Q8N7G0 328 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 ZSWIM2Q8NEG5 633 aa12.49□□□□□ -0.41
EPHB4-202ENST00000360620 ZNF483Q8TF39 744 aaPredicted RBP12.49□□□□□ -0.41
EPHB4-202ENST00000360620 NMD3Q96D46 503 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms