RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FYNP06241 537 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 RBP1P09455 135 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 GTF2E2P29084 291 aaKnown RBP10.04□□□□□ -0.8
CUX1-203ENST00000360264 SLC18A3Q16572 532 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 MFSD4BQ5TF39 518 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 REPS1Q96D71 796 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 ANKEF1Q9NU02 776 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 ARID1AO14497 2285 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 CAND2O75155 1236 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 CNTFP26441 200 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 GPC1P35052 558 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 SOAT1P35610 550 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 ANGPT1Q15389 498 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 HLFQ16534 295 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 KIAA2013Q8IYS2 634 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 GPRASP2Q96D09 838 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 TBC1D13Q9NVG8 400 aa10.04□□□□□ -0.8
CUX1-203ENST00000360264 THG1LQ9NWX6 298 aaKnown RBP10.04□□□□□ -0.8
CUX1-203ENST00000360264 PDGFRBP09619 1106 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 E2F4Q16254 413 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 E2F7Q96AV8 911 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 TMEM169Q96HH4 297 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 IFRD1O00458 451 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 ENO3P13929 434 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 PDGFRAP16234 1089 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 HHIPL2Q6UWX4 724 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ZCCHC2Q9C0B9 1178 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 GEMIN8Q9NWZ8 242 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 PRMT3O60678 531 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 AKR1B1P15121 316 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 GOLGA7BQ2TAP0 167 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ZNF484Q5JVG2 852 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 TTC33Q6PID6 262 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 KIF1CO43896 1103 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 WBP4O75554 376 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 CD2BP2O95400 341 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 GINS4Q9BRT9 223 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 AGAP1Q9UPQ3 857 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ERVK-7P63135 1459 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 REREQ9P2R6 1566 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 TRPM8Q7Z2W7 1104 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ASCC2Q9H1I8 757 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 TRMT6Q9UJA5 497 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 TMCC3Q9ULS5 477 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 A0A088AWK7 358 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 F9P00740 461 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ZNF10P21506 573 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 GPD1P21695 349 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ELP3Q9H9T3 547 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 NYAP2Q9P242 653 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 UCHL3P15374 230 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 HNMTP50135 292 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 PLOD1Q02809 727 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 PPIL6Q8IXY8 311 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 GPR101Q96P66 508 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 STRNO43815 780 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 CYP2D6P10635 497 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 CYP2C9P11712 490 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 TBL3Q12788 808 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 MMRN1Q13201 1228 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 PCSK7Q16549 785 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 STYK1Q6J9G0 422 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 RIN3Q8TB24 985 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 PRMT1Q99873 361 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 MTMR4Q9NYA4 1195 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ABI2Q9NYB9 513 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 TTC26A0AVF1 554 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 CCDC189A1A4V9 331 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 PDZK1P1A8MUH7 402 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 PEX5P50542 639 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ZNF284Q2VY69 593 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 C12orf60Q5U649 245 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 PRPF39Q86UA1 669 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 CLYBLQ8N0X4 340 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 RNF112Q9ULX5 631 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ARHGEF40Q8TER5 1519 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 DISP1Q96F81 1524 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 TRIM13O60858 407 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 ASS1P00966 412 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 MBL2P11226 248 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 TKTP29401 623 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 GCLCP48506 637 aaPredicted RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 SLC9A5Q14940 896 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 CYP51A1Q16850 503 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 SLC44A5Q8NCS7 719 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 AGR3Q8TD06 166 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 C1orf54Q8WWF1 131 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 MAP3K14Q99558 947 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 TMEM117Q9H0C3 514 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 KLHL20Q9Y2M5 609 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 RNF103O00237 685 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 STX7O15400 261 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 UQCRBP14927 111 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 RPL10AP62906 217 aaKnown RBP10.03□□□□□ -0.8
CUX1-203ENST00000360264 INPP5DQ92835 1189 aa10.03□□□□□ -0.8
CUX1-203ENST00000360264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.03□□□□□ -0.83e-6■■■■□ 19.4
CUX1-203ENST00000360264 SMIM31A0A1B0GVY4 71 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 BCAT1P54687 386 aa10.02□□□□□ -0.8
CUX1-203ENST00000360264 SLC22A9Q8IVM8 553 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms