RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 PDLIM2Q96JY6 352 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 GINS4Q9BRT9 223 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 PTPRHQ9HD43 1115 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 VTA1Q9NP79 307 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 PALLDQ8WX93 1383 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 C16orf72Q14CZ0 275 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 RIBC1Q8N443 379 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 ANKRD7Q92527 254 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 MPP4Q96JB8 637 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 IARS2Q9NSE4 1012 aaKnown RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 ATP9AO75110 1047 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 KCNMA1Q12791 1236 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 RSAD1Q9HA92 442 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 SAC3D1A6NKF1 404 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 MEI4A8MW99 385 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 TK2O00142 265 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 KLHL41O60662 606 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 ZNF189O75820 626 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 GYPCP04921 128 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 PLEKP08567 350 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-203ENST00000359759 HMGCS2P54868 508 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 CENPCQ03188 943 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 LAMB3Q13751 1172 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 C10orf120Q5SQS8 335 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 IZUMO2Q6UXV1 221 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 FEZF2Q8TBJ5 459 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 STK4Q13043 487 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.62■□□□□ 0.253e-7■■■■■ 67.1
COL18A1-203ENST00000359759 TMEM79Q9BSE2 394 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 THAP2Q9H0W7 228 aa16.62■□□□□ 0.25
COL18A1-203ENST00000359759 MTFR1Q15390 333 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 C2CD6Q53TS8 623 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 NAIF1Q69YI7 327 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 BNC2Q6ZN30 1099 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 KRCC1Q9NPI7 259 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 EIF2S1P05198 315 aaKnown RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 IGKV5-2P06315 115 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 TPP2P29144 1249 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 PRKCQQ04759 706 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 NCF4Q15080 339 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 TMEM120AQ9BXJ8 343 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 C6orf62Q9GZU0 229 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 CHST12Q9NRB3 414 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 RBP3P10745 1247 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 KLRC1P26715 233 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 GPC1P35052 558 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 IL5RAQ01344 420 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 EMC2Q15006 297 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 DDI2Q5TDH0 399 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 MTDHQ86UE4 582 aaKnown RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 CLEC10AQ8IUN9 316 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 SUGP1Q8IWZ8 645 aaKnown RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 FBXO36Q8NEA4 188 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 ST13P5Q8NFI4 369 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 SPIRE2Q8WWL2 714 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 MAGEB10Q96LZ2 347 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 FAM20BO75063 409 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 SPAG6O75602 509 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 PSMB9P28065 219 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 CHRNB3Q05901 458 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 NT5C1AQ9BXI3 368 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 DNAJC16Q9Y2G8 782 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 SSU72P8A0A1W2PR75 194 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 AGRPO00253 132 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 PSMD14O00487 310 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 H2AFYO75367 372 aaKnown RBP16.61■□□□□ 0.25
COL18A1-203ENST00000359759 ZBTB7AO95365 584 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 ISLR2Q6UXK2 745 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 MAGEB18Q96M61 343 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 SERPINB12Q96P63 405 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 GPRC5DQ9NZD1 345 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 PTCH1Q13635 1447 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 DENND1BQ6P3S1 775 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 KLHL17Q6TDP4 642 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 POLG2Q9UHN1 485 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 NAGPAQ9UK23 515 aa16.61■□□□□ 0.25
COL18A1-203ENST00000359759 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 GOLGA8TH3BQL2 631 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 ZNF862O60290 1169 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 NUP107P57740 925 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 STX5Q13190 355 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 PODNQ7Z5L7 613 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 UBASH3BQ8TF42 649 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 C19orf60Q96EN9 201 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 IL1RAPL1Q9NZN1 696 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 LRRIQ3A6PVS8 624 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-203ENST00000359759 AGAP9Q5VTM2 703 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 IQCA1LA6NCM1 817 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 C2CD2LO14523 706 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 SEZ6Q53EL9 994 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 B3GALNT2Q8NCR0 500 aa16.6■□□□□ 0.25
COL18A1-203ENST00000359759 KCTD14Q9BQ13 255 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-203ENST00000359759 NOL6Q9H6R4 1146 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms