RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 MYLK4Q86YV6 388 aaPredicted RBP10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 TRIM42Q8IWZ5 723 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 C4orf19Q8IY42 314 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 ULK2Q8IYT8 1036 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 NAT8LQ8N9F0 302 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 SLC35B2Q8TB61 432 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 AZIN2Q96A70 460 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 SERAC1Q96JX3 654 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 MCEEQ96PE7 176 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 PANX3Q96QZ0 392 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 WWP1Q9H0M0 922 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 AGO4Q9HCK5 861 aaKnown RBP10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 DNAJB4Q9UDY4 337 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 SYNPO2Q9UMS6 1093 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 CHMP2BQ9UQN3 213 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 SLC4A7Q9Y6M7 1214 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 LRRC37AA6NMS7 1700 aa10.4□□□□□ -0.75
TRAPPC2-201ENST00000359680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TMEM191CA6NGB0 347 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 E7ESA3 106 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 COPEO14579 308 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TMEM191BP0C7N4 346 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TSHRP16473 764 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 SH3BGRP55822 239 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ACTR3P61158 418 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 CDC16Q13042 620 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 CUL2Q13617 745 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 C15orf39Q6ZRI6 1047 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 LDHDQ86WU2 507 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 FAM81AQ8TBF8 368 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ZNF516Q92618 1163 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 OPTNQ96CV9 577 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 MTBPQ96DY7 904 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 CLPTM1LQ96KA5 538 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 NDNQ99608 321 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TAGLN3Q9UI15 199 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 XPO7Q9UIA9 1087 aaKnown RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 KLF11O14901 512 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 CREB3O43889 395 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ACO1P21399 889 aaKnown RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 GARTP22102 1010 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 RANBP1P43487 201 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 GDF10P55107 478 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 BASP1P80723 227 aaKnown RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TMPRSS15P98073 1019 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ZNF200P98182 395 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 OTUD4Q01804 1114 aaKnown RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 SLC18A2Q05940 514 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ENPEPQ07075 957 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 FAAP100Q0VG06 881 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 SPP2Q13103 211 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 MTMR1Q13613 665 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TKFCQ3LXA3 575 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ATG16L1Q676U5 607 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TXNRD3NBQ6F5E7 133 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 PRPF39Q86UA1 669 aaKnown RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 TREML1Q86YW5 311 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 FBXO27Q8NI29 283 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ACTL9Q8TC94 416 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ACER1Q8TDN7 264 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 WDR83Q9BRX9 315 aaKnown RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 C10orf88Q9H8K7 445 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 GPAMQ9HCL2 828 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 SAE1Q9UBE0 346 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
TRAPPC2-201ENST00000359680 CAPN14A8MX76 684 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 PLSCR1O15162 318 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 OPHN1O60890 802 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 FKBP6O75344 327 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 USP1O94782 785 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 CALB1P05937 261 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 RPL22P35268 128 aaKnown RBP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 YWHAGP61981 247 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 ZNF252P-AS1Q0IIN9 211 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 PIGHQ14442 188 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 ZACNQ401N2 412 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 TDRD10Q5VZ19 366 aaKnown RBP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 MARK2Q7KZI7 788 aaKnown RBP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 NIPA1Q7RTP0 329 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 ARID3BQ8IVW6 561 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 NME8Q8N427 588 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 TTC13Q8NBP0 860 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 IL31RAQ8NI17 732 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 SPIRE2Q8WWL2 714 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 CSRNP1Q96S65 589 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 SRPK1Q96SB4 655 aaKnown RBP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 DNAJC5Q9H3Z4 198 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 ANKEF1Q9NU02 776 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 TBC1D22BQ9NU19 505 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 SLC7A8Q9UHI5 535 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 COMMD3-BMI1R4GMX3 469 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 SLX4Q8IY92 1834 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 E5RJQ4 531 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 TMEM63AO94886 807 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 GYS1P13807 737 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 MMP8P22894 467 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 TBCCQ15814 346 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 ZYXQ15942 572 aaKnown RBP10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 KBTBD12Q3ZCT8 623 aa10.38□□□□□ -0.75
TRAPPC2-201ENST00000359680 RASSF3Q86WH2 238 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms