RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 FHDC1Q9C0D6 1143 aaPredicted RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 PCSK1NQ9UHG2 260 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 DNAJC25-GNG10A0A024R161 153 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 APOC4-APOC2K7ER74 178 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 MICAL2O94851 1124 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 C22orf31O95567 290 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 APOC2P02655 101 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CTCFP49711 727 aaPredicted RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 RAD23BP54727 409 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 ROR1Q01973 937 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 DARS2Q6PI48 645 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 ANKS1BQ7Z6G8 1248 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 SUGP1Q8IWZ8 645 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 C1orf127Q8N9H9 656 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 NLGN2Q8NFZ4 835 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 LRRC8CQ8TDW0 803 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 COPS5Q92905 334 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 ACSF2Q96CM8 615 aaPredicted RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC10A4Q96EP9 437 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 TRABDQ9H4I3 376 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 DOCK5Q9H7D0 1870 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 KLC4Q9NSK0 619 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CFAP69A5D8W1 941 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 ALOX15BO15296 676 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 SNX3O60493 162 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CILPO75339 1184 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 LRCH4O75427 683 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CNMDO75829 334 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 HNRNPH1P31943 449 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 PCK1P35558 622 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 BASP1P80723 227 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 OASLQ15646 514 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 ZKSCAN8Q15776 578 aaPredicted RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 SNCBQ16143 134 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 ICE2Q659A1 982 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 GIMAP7Q8NHV1 300 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 ZC3H15Q8WU90 426 aaKnown RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CLMNQ96JQ2 1002 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 FERMT1Q9BQL6 677 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 FRMD8Q9BZ67 464 aaPredicted RBP9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 PITPNM3Q9BZ71 974 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 VRTNQ9H8Y1 702 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 FGFR1OP2Q9NVK5 253 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 DPP3Q9NY33 737 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 CTNNAL1Q9UBT7 734 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 USP18Q9UMW8 372 aa9.76□□□□□ -0.85
GTF3C2-202ENST00000359541 H7C0C1 242 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 ABLIM1O14639 778 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 XPOTO43592 962 aaKnown RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SPAG6O75602 509 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 DNAJC8O75937 253 aaPredicted RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SETSIPP0DME0 302 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 NEFHP12036 1026 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 TSHRP16473 764 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 CA4P22748 312 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 MSH2P43246 934 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 ATP5OP48047 213 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 CDH6P55285 790 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 RNASELQ05823 741 aaKnown RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 FYB2Q5VWT5 728 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 CAPN12Q6ZSI9 719 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 USP50Q70EL3 339 aaPredicted RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 ZNF410Q86VK4 478 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 XYLT1Q86Y38 959 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC35B2Q8TB61 432 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 CCT6BQ92526 530 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 TRIM6Q9C030 488 aaPredicted RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SMYD3Q9H7B4 428 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 LRRC4CQ9HCJ2 640 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC5A4Q9NY91 659 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 TCRBV5S1A1TA0A578 114 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 RBP3P10745 1247 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 PDGFRAP16234 1089 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 CDH8P55286 799 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 GEMIN4P57678 1058 aaKnown RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 OGDHQ02218 1023 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 ZNF252P-AS1Q0IIN9 211 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 RNASEH2BQ5TBB1 312 aaKnown RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 BEST2Q8NFU1 509 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 PPTC7Q8NI37 304 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 ALKBH8Q96BT7 664 aaKnown RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 PPP1R16BQ96T49 567 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 OSBPL7Q9BZF2 842 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC40A1Q9NP59 571 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 A0A1B0GUA9 196 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 ZBTB42B2RXF5 422 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 GPR25O00155 361 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SDC4P31431 198 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 ZNF143P52747 638 aaPredicted RBP9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 PDK2Q15119 407 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 BOLA3Q53S33 107 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 KCNT1Q5JUK3 1230 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 DPP9Q86TI2 863 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 WDTC1Q8N5D0 677 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 SPATA18Q8TC71 538 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 KAT2BQ92831 832 aa9.75□□□□□ -0.85
GTF3C2-202ENST00000359541 CPXM1Q96SM3 734 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms