RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 NOP9Q86U38 636 aaKnown RBP11.76□□□□□ -0.53
TMC3-201ENST00000359440 EXOC3L1Q86VI1 746 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 PPHLN1Q8NEY8 458 aaKnown RBP11.76□□□□□ -0.53
TMC3-201ENST00000359440 EFCAB1Q9HAE3 211 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 GAKO14976 1311 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 UBR1Q8IWV7 1749 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 ANGPT2O15123 496 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 ARP10275 920 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 MYL4P12829 197 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 HADHAP40939 763 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 HSD17B4P51659 736 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 NAB1Q13506 487 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 TMEM132DQ14C87 1099 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 VPS72Q15906 364 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 ARHGEF19Q8IW93 802 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 TCP10LQ8TDR4 215 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 TLCD1Q96CP7 247 aa11.76□□□□□ -0.53
TMC3-201ENST00000359440 TARS2Q9BW92 718 aaKnown RBP11.76□□□□□ -0.53
TMC3-201ENST00000359440 C5orf60A6NFR6 353 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 AIM2O14862 343 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SRP72O76094 671 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 ATP6V1C1P21283 382 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 PAX7P23759 505 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 BRD2P25440 801 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 EPHB2P29323 1055 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 AQP5P55064 265 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 POU5F1BQ06416 359 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 CBWD6Q4V339 395 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 CBWD3Q5JTY5 395 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 CBWD5Q5RIA9 395 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 MROH9Q5TGP6 573 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 TXNRD3Q86VQ6 643 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SEPT12Q8IYM1 358 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 KIF12Q96FN5 646 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 TBCBQ99426 244 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 METTL5Q9NRN9 209 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMC3-201ENST00000359440 THAP1Q9NVV9 213 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 MAGED2Q9UNF1 606 aaPredicted RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 AGAP1Q9UPQ3 857 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SDR42E2A6NKP2 422 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 WNT7AO00755 349 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 VDRP11473 427 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 NCALDP61601 193 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 RWDD4Q6NW29 188 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 ZFP1Q6P2D0 407 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 EFL1Q7Z2Z2 1120 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 C12orf56Q8IXR9 622 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 SHC3Q92529 594 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 CCDC126Q96EE4 140 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 ZFRQ96KR1 1074 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 CYP3A43Q9HB55 503 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 GID8Q9NWU2 228 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SEPT3Q9UH03 358 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 AP4S1Q9Y587 144 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SPATA31A5Q5VU36 1347 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SPATA31A7Q8IWB4 1347 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 BCL9LQ86UU0 1499 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 TTC36A6NLP5 189 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SYCE1LA8MT33 242 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 TLR2O60603 784 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 VIL1P09327 827 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 SERPINB8P50452 374 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 PEX5P50542 639 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 HADHBP55084 474 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 ILF2Q12905 390 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 USP10Q14694 798 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 WLSQ5T9L3 541 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 DSTYKQ6XUX3 929 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 DPP9Q86TI2 863 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 APOBEC3FQ8IUX4 373 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 MAP4K3Q8IVH8 894 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 LRRC57Q8N9N7 239 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 TMEM121Q9BTD3 319 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 NRDE2Q9H7Z3 1164 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 C2CD2LO14523 706 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 TGM2P21980 687 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 IREB2P48200 963 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 TPI1P60174 286 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 EEPD1Q7L9B9 569 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 LINC00523Q86TU6 105 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 TASP1Q9H6P5 420 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 STX18Q9P2W9 335 aaKnown RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 ZNF70Q9UC06 446 aaPredicted RBP11.75□□□□□ -0.53
TMC3-201ENST00000359440 PNMA3Q9UL41 463 aa11.75□□□□□ -0.53
TMC3-201ENST00000359440 CLPTM1O96005 669 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 SSTR3P32745 418 aaPredicted RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 ATF7IP2Q5U623 682 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 NAPEPLDQ6IQ20 393 aa11.74□□□□□ -0.53
TMC3-201ENST00000359440 BNC2Q6ZN30 1099 aaPredicted RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
TMC3-201ENST00000359440 SH2D3AQ9BRG2 576 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms