RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 TYMPP19971 482 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 EPHB4P54760 987 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 NOMO2Q5JPE7 1267 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 PPP1R26Q5T8A7 1209 aaPredicted RBP14.23□□□□□ -0.13
CCDC197-201ENST00000359253 ARCQ7LC44 396 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 RTN4RL1Q86UN2 441 aaPredicted RBP14.23□□□□□ -0.13
CCDC197-201ENST00000359253 XYLT1Q86Y38 959 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 RNF169Q8NCN4 708 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 B3GALNT2Q8NCR0 500 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 HNRNPLLQ8WVV9 542 aaKnown RBP14.23□□□□□ -0.13
CCDC197-201ENST00000359253 MS4A14Q96JA4 679 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 RNPC3Q96LT9 517 aaKnown RBP14.23□□□□□ -0.13
CCDC197-201ENST00000359253 CPXM1Q96SM3 734 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 PARD6BQ9BYG5 372 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 OSBPL7Q9BZF2 842 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 UBXN6Q9BZV1 441 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 SLITRK6Q9H5Y7 841 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 CDH9Q9ULB4 789 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 MTUS1Q9ULD2 1270 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 PCDHB7Q9Y5E2 793 aa14.23□□□□□ -0.13
CCDC197-201ENST00000359253 KRIT1O00522 736 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 ENPP3O14638 875 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 TRAPPC3O43617 180 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 ACRP10323 421 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 FGFR1P11362 822 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 PTPN1P18031 435 aaKnown RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 SSTR3P32745 418 aaPredicted RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 DNA2P51530 1060 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 PLCB3Q01970 1234 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 NAA30Q147X3 362 aaPredicted RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 MAPRE1Q15691 268 aaKnown RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 HADHQ16836 314 aaKnown RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 MAATS1Q7Z4T9 603 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 POLNQ7Z5Q5 900 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 DEFB128Q7Z7B8 93 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 KATNAL2Q8IYT4 538 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 TMEM130Q8N3G9 435 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 NOA1Q8NC60 698 aaKnown RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 CCDC26Q8TAB7 109 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 FAM193BQ96PV7 902 aaPredicted RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 ACBD6Q9BR61 282 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 ANKZF1Q9H8Y5 726 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 DDX56Q9NY93 547 aaKnown RBP14.22□□□□□ -0.13
CCDC197-201ENST00000359253 CYTH4Q9UIA0 394 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 LTBP2Q14767 1821 aa14.22□□□□□ -0.13
CCDC197-201ENST00000359253 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 XPO1O14980 1071 aaKnown RBP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 ATP8B1O43520 1251 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 B3GAT3O94766 335 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 POMCP01189 267 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 PDGFRBP09619 1106 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 LMO2P25791 158 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 PLA2G4AP47712 749 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 COPS2P61201 443 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 DSC1Q08554 894 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 C2orf54Q08AI8 447 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 ORC1Q13415 861 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 LONRF2Q1L5Z9 754 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 MAP9Q49MG5 647 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 WSCD1Q658N2 575 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 C8orf74Q6P047 294 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 TTC30AQ86WT1 665 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 RCOR2Q8IZ40 523 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 C12orf29Q8N999 325 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 EIF1ADQ8N9N8 165 aaKnown RBP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 DBF4BQ8NFT6 615 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 EXD1Q8NHP7 514 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 UBA3Q8TBC4 463 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 KCTD13Q8WZ19 329 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 TSC1Q92574 1164 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 ALG3Q92685 438 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 BTBD6Q96KE9 485 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 SUSD3Q96L08 255 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 MCEEQ96PE7 176 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 DUSP16Q9BY84 665 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 MRPL9Q9BYD2 267 aaKnown RBP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 HOMER3Q9NSC5 361 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 RNF19AQ9NV58 838 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 ASNSD1Q9NWL6 643 aa14.21□□□□□ -0.13
CCDC197-201ENST00000359253 DDX43Q9NXZ2 648 aaKnown RBP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 CHORDC1Q9UHD1 332 aaPredicted RBP14.21□□□□□ -0.13
CCDC197-201ENST00000359253 CASTOR2A6NHX0 329 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 RNF8O76064 485 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 ZRANB2O95218 330 aaKnown RBP eCLIP14.2□□□□□ -0.14
CCDC197-201ENST00000359253 FGGP02679 453 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 ERBB2P04626 1255 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 KRT7P08729 469 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 PCK1P35558 622 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 RPL7AP62424 266 aaKnown RBP14.2□□□□□ -0.14
CCDC197-201ENST00000359253 SLC6A3Q01959 620 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 PDE4CQ08493 712 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 TIGD5Q53EQ6 642 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 C2CD6Q53TS8 623 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 C9orf50Q5SZB4 431 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 CYP4A22Q5TCH4 519 aa14.2□□□□□ -0.14
CCDC197-201ENST00000359253 DCAF12L1Q5VU92 463 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms