RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 BRD2P25440 801 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 CXCR5P32302 372 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 GBP1P32455 592 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 ACADSBP45954 432 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 PTP4A2Q12974 167 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 GRIK3Q13003 919 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 HADHQ16836 314 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 LONRF2Q1L5Z9 754 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 MMS22LQ6ZRQ5 1243 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 PASD1Q8IV76 773 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 IFT20Q8IY31 132 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 COG1Q8WTW3 980 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 STK32AQ8WU08 396 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 APBB2Q92870 758 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 NECAB3Q96P71 396 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 PPP1R10Q96QC0 940 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 TGS1Q96RS0 853 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 SLITRK6Q9H5Y7 841 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 ACP6Q9NPH0 428 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 DDX56Q9NY93 547 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 RASAL2Q9UJF2 1139 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 COG5Q9UP83 839 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 HES2Q9Y543 173 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 INSL6Q9Y581 213 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 V9GYY5 206 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-201ENST00000359005 MYH10P35580 1976 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 SIGLEC16A6NMB1 481 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 ZNF185O15231 689 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 HOXA2O43364 376 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 RNF8O76064 485 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 ODC1P11926 461 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 KRT3P12035 628 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 WARSP23381 471 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 RAP1GAPP47736 663 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 GATMP50440 423 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 DNA2P51530 1060 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 CDH8P55286 799 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 MAMLD1Q13495 774 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 LRRC38Q5VT99 294 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 ARHGAP17Q68EM7 881 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 GLB1LQ6UWU2 654 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 SLC24A5Q71RS6 500 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 CRYBG2Q8N1P7 616 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 C1orf131Q8NDD1 294 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 FNIP1Q8TF40 1166 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 RBM41Q96IZ5 413 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 FAM84AQ96KN4 292 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 ZMAT2Q96NC0 199 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 ASB2Q96Q27 587 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 PSMB7Q99436 277 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 PARD6BQ9BYG5 372 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 RC3H2Q9HBD1 1191 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 KLK14Q9P0G3 267 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 TUBGCP4Q9UGJ1 667 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 RAB21Q9UL25 225 aa11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 PDCD11Q14690 1871 aaKnown RBP11.34□□□□□ -0.59
TRAPPC4-201ENST00000359005 ARL5CA6NH57 179 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 O00370 1275 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 CYB561D2O14569 222 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 NDC80O14777 642 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 TRAPPC3O43617 180 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 MICAL2O94851 1124 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 KRT7P08729 469 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 RHOXF2BP0C7M4 288 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 BMP1P13497 986 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 H2AFXP16104 143 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 PCSK1P29120 753 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 MLH1P40692 756 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 GABRB2P47870 512 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 KCNQ1P51787 676 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 BCAT1P54687 386 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 LILRA4P59901 499 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 COPS2P61201 443 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 PSMC1P62191 440 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 DSC3Q14574 896 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 MAPRE1Q15691 268 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 TJAP1Q5JTD0 557 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 GLRA4Q5JXX5 417 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 DSTYKQ6XUX3 929 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 ADGRF2Q8IZF7 708 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 THEM5Q8N1Q8 247 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 NIPA2Q8N8Q9 360 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 EIF1ADQ8N9N8 165 aaKnown RBP11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 C18orf25Q96B23 403 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 ELMO3Q96BJ8 720 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 YME1L1Q96TA2 773 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 ADAM2Q99965 735 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 RHOXF2Q9BQY4 288 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 ELOVL4Q9GZR5 314 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 RAB17Q9H0T7 212 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 RGS18Q9NS28 235 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 ASNSD1Q9NWL6 643 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 STIM2Q9P246 746 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms