RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 KDELR1P24390 212 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 EDNRBP24530 442 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 ELF1P32519 619 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 YARSP54577 528 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 MYO1EQ12965 1108 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 MOGSQ13724 837 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 ATF7IP2Q5U623 682 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 LBX2Q6XYB7 198 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 RFX6Q8HWS3 928 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 DHX37Q8IY37 1157 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 KIAA0319LQ8IZA0 1049 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 TRPM4Q8TD43 1214 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 HSPH1Q92598 858 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 PAFAH2Q99487 392 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 INO80BQ9C086 356 aaPredicted RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 C2orf40Q9H1Z8 148 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 CXorf56Q9H5V9 222 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 BTBD7Q9P203 1132 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 RABGEF1Q9UJ41 708 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 CHKBQ9Y259 395 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 EFR3BQ9Y2G0 817 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 TMEM63AO94886 807 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 ERBB2P04626 1255 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 TARSP26639 723 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 RPL22P35268 128 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 CDH8P55286 799 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 BASP1P80723 227 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 RASA2Q15283 850 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 KLHL38Q2WGJ6 581 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 BBS9Q3SYG4 887 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 ZNF667Q5HYK9 610 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 NAT8LQ8N9F0 302 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 KCTD6Q8NC69 237 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 FBXO36Q8NEA4 188 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 FNIP1Q8TF40 1166 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 WDR83Q9BRX9 315 aaKnown RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 CALN1Q9BXU9 219 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 FRMD8P1Q9BZ68 369 aaPredicted RBP9.01□□□□□ -0.97
RFX3-202ENST00000358730 LHX5Q9H2C1 402 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 SNCAIPQ9Y6H5 919 aa9.01□□□□□ -0.97
RFX3-202ENST00000358730 TCRBV7S3A2A0A539 114 aa9□□□□□ -0.97
RFX3-202ENST00000358730 MCF2LO15068 1137 aa9□□□□□ -0.97
RFX3-202ENST00000358730 GAS2O43903 313 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 B4GALT4O60513 344 aa9□□□□□ -0.97
RFX3-202ENST00000358730 DCTN3O75935 186 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ZWINTO95229 277 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
RFX3-202ENST00000358730 RPSAP08865 295 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 ALDH3A1P30838 453 aa9□□□□□ -0.97
RFX3-202ENST00000358730 EIF3EP60228 445 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 ATP11AP98196 1134 aa9□□□□□ -0.97
RFX3-202ENST00000358730 HSDL1Q3SXM5 330 aa9□□□□□ -0.97
RFX3-202ENST00000358730 NOL9Q5SY16 702 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 EEF1DP3Q658K8 133 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TSHZ1Q6ZSZ6 1077 aa9□□□□□ -0.97
RFX3-202ENST00000358730 C3orf62Q6ZUJ4 267 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RPAINQ86UA6 219 aa9□□□□□ -0.97
RFX3-202ENST00000358730 XYLT1Q86Y38 959 aa9□□□□□ -0.97
RFX3-202ENST00000358730 UNC45BQ8IWX7 931 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TMEM130Q8N3G9 435 aa9□□□□□ -0.97
RFX3-202ENST00000358730 FAM71DQ8N9W8 422 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TRAPPC12Q8WVT3 735 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TMEM237Q96Q45 408 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RAB3IPQ96QF0 476 aaPredicted RBP9□□□□□ -0.97
RFX3-202ENST00000358730 PHACTR1Q9C0D0 580 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ACSS3Q9H6R3 686 aa9□□□□□ -0.97
RFX3-202ENST00000358730 SMYD3Q9H7B4 428 aa9□□□□□ -0.97
RFX3-202ENST00000358730 EBF2Q9HAK2 575 aa9□□□□□ -0.97
RFX3-202ENST00000358730 HMGXB4Q9UGU5 601 aa9□□□□□ -0.97
RFX3-202ENST00000358730 XPO7Q9UIA9 1087 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 ZBTB42B2RXF5 422 aa9□□□□□ -0.97
RFX3-202ENST00000358730 GOLGA8RI6L899 631 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ARIH2O95376 493 aa9□□□□□ -0.97
RFX3-202ENST00000358730 NFICP08651 508 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TGFB3P10600 412 aa9□□□□□ -0.97
RFX3-202ENST00000358730 FGFR1P11362 822 aa9□□□□□ -0.97
RFX3-202ENST00000358730 PROZP22891 400 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ADRA1DP25100 572 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RAD23BP54727 409 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TAF5Q15542 800 aa9□□□□□ -0.97
RFX3-202ENST00000358730 DEFB132Q7Z7B7 95 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RIOX2Q8IUF8 465 aa9□□□□□ -0.97
RFX3-202ENST00000358730 PALM2Q8IXS6 379 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TMEM192Q8IY95 271 aa9□□□□□ -0.97
RFX3-202ENST00000358730 PDIK1LQ8N165 341 aa9□□□□□ -0.97
RFX3-202ENST00000358730 SLC16A10Q8TF71 515 aa9□□□□□ -0.97
RFX3-202ENST00000358730 C10orf82Q8WW14 230 aa9□□□□□ -0.97
RFX3-202ENST00000358730 L3MBTL3Q96JM7 780 aaPredicted RBP9□□□□□ -0.97
RFX3-202ENST00000358730 SDCBP2Q9H190 292 aa9□□□□□ -0.97
RFX3-202ENST00000358730 NOP53Q9NZM5 478 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 WDR35Q9P2L0 1181 aa9□□□□□ -0.97
RFX3-202ENST00000358730 FETUBQ9UGM5 382 aa9□□□□□ -0.97
RFX3-202ENST00000358730 CHMP2BQ9UQN3 213 aa9□□□□□ -0.97
RFX3-202ENST00000358730 PPME1Q9Y570 386 aa9□□□□□ -0.97
RFX3-202ENST00000358730 EVPLQ92817 2033 aa9□□□□□ -0.97
RFX3-202ENST00000358730 WDR91A4D1P6 747 aa9□□□□□ -0.97
RFX3-202ENST00000358730 APOC4-APOC2K7ER74 178 aa9□□□□□ -0.97
RFX3-202ENST00000358730 M0QYV0 167 aa9□□□□□ -0.97
RFX3-202ENST00000358730 FZD9O00144 591 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms