RNA–Protein interactions for RNA: ENST00000357613.8

TMEM170A-201, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best) BASIC

Gene TMEM170A, Length 4,959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-201ENST00000357613 FAM47DPA6NHR8 397 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 TRIM49D1C9J1S8 452 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 ACADSBP45954 432 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 OTUD4Q01804 1114 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 Q4G0T1 1027 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 BOLA3Q53S33 107 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 LVRNQ6Q4G3 990 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 MFN1Q8IWA4 741 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 PRPF4O43172 522 aaKnown RBP eCLIP12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 PLIN5Q00G26 463 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 EFEMP1Q12805 493 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 MAPK7Q13164 816 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 ZRANB3Q5FWF4 1079 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 EPS8L3Q8TE67 593 aaKnown RBP12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 NUDT5Q9UKK9 219 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 SETSIPP0DME0 302 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 HSD17B3P37058 310 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 ARHGDIAP52565 204 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 ADGRF2Q8IZF7 708 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 KAT5Q92993 513 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 SYNDIG1Q9H7V2 258 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 IRF6O14896 467 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 HMOX2P30519 316 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 INPP1P49441 399 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 WWP1Q9H0M0 922 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 IL1RL2Q9HB29 575 aa12.74□□□□□ -0.37
TMEM170A-201ENST00000357613 POLBP06746 335 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 THP07101 528 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 MAGEA9P43362 315 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 CASP5P51878 434 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 CDH18Q13634 790 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ZNF484Q5JVG2 852 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 RXFP2Q8WXD0 754 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 SYN2Q92777 582 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 PKP3Q9Y446 797 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 AIM2O14862 343 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 PQBP1O60828 265 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 GARTP22102 1010 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 LSP1P33241 339 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 PGM1P36871 562 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 AVPR1AP37288 418 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 PTPN11Q06124 597 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ARHGEF19Q8IW93 802 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ZNF473Q8WTR7 871 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 GTF3C2Q8WUA4 911 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 FBXO32Q969P5 355 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 XPO6Q96QU8 1125 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ISCUQ9H1K1 167 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 RUBCNLQ9H714 662 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 H0Y626 953 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 SCAMP3O14828 347 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 HIST1H2AGP0C0S8 130 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 HIST1H2ADP20671 130 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 GLRBP48167 497 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 RAD23BP54727 409 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 HSP90AA5PQ58FG0 334 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 PTRHD1Q6GMV3 140 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 SLC35C1Q96A29 364 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 HIST1H2AHQ96KK5 128 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 HIST1H2AJQ99878 128 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 H2AFJQ9BTM1 129 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 KCTD10Q9H3F6 313 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 STARD7Q9NQZ5 370 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 HES2Q9Y543 173 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 V9GYQ6 96 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ZNF197O14709 1029 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ONECUT3O60422 494 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 SEC24DO94855 1032 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 VGLL4Q14135 290 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ARHGEF7Q14155 803 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ARID3BQ8IVW6 561 aaPredicted RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 STKLD1Q8NE28 680 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 SLC5A5Q92911 643 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 ERLEC1Q96DZ1 483 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 CELF6Q96J87 481 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 FAM111AQ96PZ2 611 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 CGRRF1Q99675 332 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 DUSP9Q99956 384 aaKnown RBP12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 IDI2Q9BXS1 227 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 SFMBT1Q9UHJ3 866 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 DISP2A7MBM2 1401 aa12.73□□□□□ -0.37
TMEM170A-201ENST00000357613 TRIM66O15016 1216 aa12.72□□□□□ -0.37
TMEM170A-201ENST00000357613 ZSCAN9O15535 394 aaPredicted RBP12.72□□□□□ -0.37
TMEM170A-201ENST00000357613 MEFVO15553 781 aaPredicted RBP12.72□□□□□ -0.37
TMEM170A-201ENST00000357613 JCHAINP01591 159 aa12.72□□□□□ -0.37
TMEM170A-201ENST00000357613 ODC1P11926 461 aa12.72□□□□□ -0.37
TMEM170A-201ENST00000357613 PNPLA4P41247 253 aa12.72□□□□□ -0.37
TMEM170A-201ENST00000357613 GRIK4Q16099 956 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms