RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PRCPP42785 496 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MAPK9P45984 424 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 SKP1P63208 163 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ALDH6A1Q02252 535 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 SGCGQ13326 291 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PWP2Q15269 919 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ALFQ53S48 1182 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 NFRKBQ6P4R8 1299 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 DSG4Q86SJ6 1040 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF677Q86XU0 584 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MYO1HQ8N1T3 1032 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MCOLN3Q8TDD5 553 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 WDR41Q9HAD4 459 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 LIMA1Q9UHB6 759 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 GTF2A1LQ9UNN4 478 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 NRKQ7Z2Y5 1582 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PRMT3O60678 531 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PHF2O75151 1096 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ZC3H11AO75152 810 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RASSF9O75901 435 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 FDFT1P37268 417 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 DNAL1Q4LDG9 190 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 TIGD7Q6NT04 549 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 KCTD17Q8N5Z5 321 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 FAM151AQ8WW52 585 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CYGBQ8WWM9 190 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 C19orf60Q96EN9 201 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 AHCYL2Q96HN2 611 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 STK33Q9BYT3 514 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PPP2R3BQ9Y5P8 575 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 IFRD1O00458 451 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 WBP4O75554 376 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 SGO1Q5FBB7 561 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PAPD7Q5XG87 772 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ARMC2Q8NEN0 867 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 DTX3LQ8TDB6 740 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CMTM5Q96DZ9 223 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 AIFM3Q96NN9 605 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 TSC22D3Q99576 134 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PCMTD2Q9NV79 361 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 APPL1Q9UKG1 709 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 LRRC10BA6NIK2 292 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CYP27B1O15528 508 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 C4BPBP20851 252 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MUTP22033 750 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RHOAP61586 193 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 KBTBD12Q3ZCT8 623 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 TTC39BQ5VTQ0 682 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 BTNL9Q6UXG8 535 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CLEC4FQ8N1N0 589 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 HPDLQ96IR7 371 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 RNPC3Q96LT9 517 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MRPL9Q9BYD2 267 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 VPS33BQ9H267 617 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 STARD7Q9NQZ5 370 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CHST12Q9NRB3 414 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 DPP3Q9NY33 737 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 TCF7P36402 384 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF543Q08ER8 600 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PPIL2Q13356 520 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 NR1I3Q14994 352 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MRNIPQ6NTE8 343 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MTSS1LQ765P7 747 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 CPA5Q8WXQ8 436 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 GFM2Q969S9 779 aaKnown RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 PPP1R14AQ96A00 147 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 AGAP3Q96P47 875 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 TAF1DQ9H5J8 278 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-202ENST00000356435 MSRAQ9UJ68 235 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 ALKQ9UM73 1620 aa5.75□□□□□ -1.49
PTPRD-202ENST00000356435 DEFA1P59665 94 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 DEFA3P59666 94 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ANKMY2Q8IV38 441 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ATP6V1G3Q96LB4 118 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 UBE2OQ9C0C9 1292 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PDGFCQ9NRA1 345 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 NCKAP1Q9Y2A7 1128 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 TEX28O15482 410 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 NCK2O43639 380 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 HOXC6P09630 235 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 TNFRSF8P28908 595 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 SETD3Q86TU7 594 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 SLC16A10Q8TF71 515 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 TMA16Q96EY4 203 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 WNK4Q96J92 1243 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PPP1R36Q96LQ0 422 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 MRPS26Q9BYN8 205 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FRMD8Q9BZ67 464 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 DDX28Q9NUL7 540 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 DPEP1P16444 411 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PBLDP30039 288 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PMS1P54277 932 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CSE1LP55060 971 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CENPCQ03188 943 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CCNI2Q6ZMN8 369 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 TRAPPC11Q7Z392 1133 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 TFB1MQ8WVM0 346 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 DEPDC7Q96QD5 511 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 OSBPL6Q9BZF3 934 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms