RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CTCFP49711 727 aaPredicted RBP12.86□□□□□ -0.35
COLCA1-201ENST00000355430 CUL3Q13618 768 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 HIC1Q14526 733 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 TAF2Q6P1X5 1199 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 IRF2BP2Q7Z5L9 587 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 IQCKQ8N0W5 287 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 FAM71DQ8N9W8 422 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 ZNF512Q96ME7 567 aaPredicted RBP12.86□□□□□ -0.35
COLCA1-201ENST00000355430 KLHL8Q9P2G9 620 aaPredicted RBP12.86□□□□□ -0.35
COLCA1-201ENST00000355430 SH3BP1Q9Y3L3 701 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 L3MBTL1Q9Y468 752 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 RBAK-RBAKDNI3L0D1 243 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 TOMM70O94826 608 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 APRTP07741 180 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 ZBTB48P10074 688 aaPredicted RBP12.86□□□□□ -0.35
COLCA1-201ENST00000355430 CUL2Q13617 745 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
COLCA1-201ENST00000355430 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 MGAT5BQ3V5L5 792 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 AGR3Q8TD06 166 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 KCNMB3Q9NPA1 279 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 CTNNAL1Q9UBT7 734 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 SNX9Q9Y5X1 595 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 MROH7Q68CQ1 1323 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 B2RBV5 119 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 TLR2O60603 784 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 PPFIA2O75334 1257 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 LCA5LO95447 670 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 STX1BP61266 288 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 WDR72Q3MJ13 1102 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 PAN2Q504Q3 1202 aaKnown RBP12.86□□□□□ -0.35
COLCA1-201ENST00000355430 SLC5A5Q92911 643 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 DCLK3Q9C098 648 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 MID2Q9UJV3 735 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 OPLAHO14841 1288 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 RAB27AP51159 221 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 QPCTQ16769 361 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 SEZ6Q53EL9 994 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 THTPAQ9BU02 230 aa12.86□□□□□ -0.35
COLCA1-201ENST00000355430 H3BRB1 525 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 MUTP22033 750 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 AP1B1Q10567 949 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 TAF1BQ53T94 588 aaPredicted RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 SPDYCQ5MJ68 293 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 OTOP1Q7RTM1 612 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 NOP9Q86U38 636 aaKnown RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 ABTB1Q969K4 478 aaPredicted RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 ATXN7L3BQ96GX2 97 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 TUT1Q9H6E5 874 aaKnown RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 DNAJC18Q9H819 358 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 C17orf75Q9HAS0 396 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 NINJ2Q9NZG7 142 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 TISP43B9A030 160 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 H3BRJ5 948 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 TBC1D12O60347 775 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 NPTX2P47972 431 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 IRX1P78414 480 aaPredicted RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 ATXN2LQ8WWM7 1075 aaKnown RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 FAM96AQ9H5X1 160 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 KANSL3Q9P2N6 904 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 HEY2Q9UBP5 337 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 PPME1Q9Y570 386 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 CREB3O43889 395 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 ODC1P11926 461 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 DLG4P78352 724 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 MAPRE1Q15691 268 aaKnown RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 ERMARDQ5T6L9 678 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 JADE1Q6IE81 842 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 NECAB2Q7Z6G3 386 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 RIOX2Q8IUF8 465 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 FAM111AQ96PZ2 611 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 NOL4O94818 638 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 DRD4P21917 467 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 MFSD10Q14728 455 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 TMEM132BQ14DG7 1078 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 PRCCQ92733 491 aaPredicted RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 DLGAP2Q9P1A6 1054 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 UBQLN1Q9UMX0 589 aaKnown RBP12.85□□□□□ -0.35
COLCA1-201ENST00000355430 NCANO14594 1321 aa12.85□□□□□ -0.35
COLCA1-201ENST00000355430 KPNA7A9QM74 516 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 PROSCO94903 275 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 UBTFL6P0CB48 400 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 PRMT2P55345 433 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 STX3Q13277 289 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 RCN1Q15293 331 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 CATSPERGQ6ZRH7 1159 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 ANKRD23Q86SG2 305 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 METTL5Q9NRN9 209 aaKnown RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 TYK2P29597 1187 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 MARCKSL1P49006 195 aa12.84□□□□□ -0.35
COLCA1-201ENST00000355430 ALDH5A1P51649 535 aaPredicted RBP12.84□□□□□ -0.35
COLCA1-201ENST00000355430 DDX53Q86TM3 631 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms