RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 INHBEP58166 350 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 GRM1Q13255 1194 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 DNAL1Q4LDG9 190 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 HP1BP3Q5SSJ5 553 aaPredicted RBP11.96□□□□□ -0.5
CAPN9-202ENST00000354537 C6orf163Q5TEZ5 329 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 FKBP1CQ5VVH2 108 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 ADGRG6Q86SQ4 1221 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 FNIP1Q8TF40 1166 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 PTPRN2Q92932 1015 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 GPRASP2Q96D09 838 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 SH2D3AQ9BRG2 576 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 MKS1Q9NXB0 559 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.5
CAPN9-202ENST00000354537 PCDHGC3Q9UN70 934 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.96□□□□□ -0.5
CAPN9-202ENST00000354537 PPME1Q9Y570 386 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 WDR91A4D1P6 747 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 CAPN14A8MX76 684 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 F8VP50 259 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 FCHO1O14526 889 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 IFNB1P01574 187 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 OVGP1Q12889 678 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 DYNC1I2Q13409 638 aaKnown RBP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 GNPTABQ3T906 1256 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 MSS51Q4VC12 460 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 CAPN12Q6ZSI9 719 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 SCYL3Q8IZE3 742 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 RSAD2Q8WXG1 361 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 ELMO3Q96BJ8 720 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 C1orf21Q9H246 121 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 IL1RAPL1Q9NZN1 696 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 ZNF180Q9UJW8 692 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 SORCS3Q9UPU3 1222 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 IKBKGQ9Y6K9 419 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 TCF4P15884 667 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 CACNA2D1P54289 1103 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 ZNF200P98182 395 aaPredicted RBP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 OTUD4Q01804 1114 aaKnown RBP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 PTK7Q13308 1070 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 EFTUD2Q15029 972 aaKnown RBP eCLIP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 DBN1Q16643 649 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 ANKRD22Q5VYY1 191 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 SPOPLQ6IQ16 392 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 PDCD7Q8N8D1 485 aaKnown RBP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 ACTL9Q8TC94 416 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 UCMAQ8WVF2 138 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 MRRFQ96E11 262 aaKnown RBP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 MCEEQ96PE7 176 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 TAAR1Q96RJ0 339 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 PDCD2LQ9BRP1 358 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 WDR83Q9BRX9 315 aaKnown RBP11.95□□□□□ -0.5
CAPN9-202ENST00000354537 XPNPEP1Q9NQW7 623 aa11.95□□□□□ -0.5
CAPN9-202ENST00000354537 WDR46O15213 610 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 CSDE1O75534 798 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 CIB2O75838 187 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 RTN3O95197 1032 aaPredicted RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 PSAPP07602 524 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 WEE2P0C1S8 567 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 KCNA3P22001 575 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 STIP1P31948 543 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SERPINB4P48594 390 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 OGDHQ02218 1023 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 LGSNQ5TDP6 509 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 TMCO4Q5TGY1 634 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 AAGABQ6PD74 315 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 KYAT3Q6YP21 454 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 LPAR1Q92633 364 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 FGD4Q96M96 766 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 ARHGEF4Q9NR80 690 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 KRT82Q9NSB4 513 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 RBAKQ9NYW8 714 aaPredicted RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 XPO7Q9UIA9 1087 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 NUB1Q9Y5A7 615 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SLC4A7Q9Y6M7 1214 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 FKBP6O75344 327 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 TM7SF2O76062 418 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 INHBAP08476 426 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 MYL2P10916 166 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 POLR2BP30876 1174 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SH3BGRP55822 239 aaPredicted RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SESN3P58005 492 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 NLRP11P59045 1033 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 MAP3K10Q02779 954 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SLC25A11Q02978 314 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 TBC1D10BQ4KMP7 808 aaPredicted RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 TTC39BQ5VTQ0 682 aaPredicted RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 ZC3H18Q86VM9 953 aaKnown RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 MYLK4Q86YV6 388 aaPredicted RBP11.94□□□□□ -0.5
CAPN9-202ENST00000354537 IMPG2Q9BZV3 1241 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 WWP1Q9H0M0 922 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SLC38A10Q9HBR0 1119 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms