RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 GAB4Q2WGN9 574 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 EML3Q32P44 896 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 SHC4Q6S5L8 630 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 SPATA2LQ8IUW3 424 aaPredicted RBP16.99■□□□□ 0.31
PDGFA-201ENST00000354513 SCN4BQ8IWT1 228 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 GAB3Q8WWW8 586 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 HPDLQ96IR7 371 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 ANKRD36BP1Q96IX9 119 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 ZSCAN16Q9H4T2 348 aaPredicted RBP16.99■□□□□ 0.31
PDGFA-201ENST00000354513 ECT2Q9H8V3 914 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 TRPC7Q9HCX4 862 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 TMEM30AQ9NV96 361 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 UXTQ9UBK9 157 aaPredicted RBP16.99■□□□□ 0.31
PDGFA-201ENST00000354513 MYH10P35580 1976 aa16.99■□□□□ 0.31
PDGFA-201ENST00000354513 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.98■□□□□ 0.31
PDGFA-201ENST00000354513 SLC30A4O14863 429 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 KIAA0391O15091 583 aaKnown RBP16.98■□□□□ 0.31
PDGFA-201ENST00000354513 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDGFA-201ENST00000354513 WARSP23381 471 aaKnown RBP16.98■□□□□ 0.31
PDGFA-201ENST00000354513 PCSK1P29120 753 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 CASP1P29466 404 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 CACNA2D1P54289 1103 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 PDGFRLQ15198 375 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 CNNM4Q6P4Q7 775 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 DPH6Q7L8W6 267 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 ARL14EPQ8N8R7 260 aaPredicted RBP16.98■□□□□ 0.31
PDGFA-201ENST00000354513 ZNF507Q8TCN5 953 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 NETO1Q8TDF5 533 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 OSCP1Q8WVF1 389 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 MRPL45Q9BRJ2 306 aaKnown RBP16.98■□□□□ 0.31
PDGFA-201ENST00000354513 THADAQ6YHU6 1953 aa16.98■□□□□ 0.31
PDGFA-201ENST00000354513 SPTBN2O15020 2390 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 TRAV19A0A0A6YYK7 116 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 ZNF233A6NK53 670 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 K7ELQ4 463 aaPredicted RBP16.97■□□□□ 0.31
PDGFA-201ENST00000354513 SPTLC2O15270 562 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 PPP6R2O75170 966 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 CST3P01034 146 aaPredicted RBP16.97■□□□□ 0.31
PDGFA-201ENST00000354513 USP17L7P0C7H9 530 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 TCF3P15923 654 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 RAP1GAPP47736 663 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 GRSF1Q12849 480 aaKnown RBP eCLIP16.97■□□□□ 0.31
PDGFA-201ENST00000354513 STK38Q15208 465 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 TRAPPC11Q7Z392 1133 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 KBTBD6Q86V97 674 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 WDR49Q8IV35 697 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 DHX58Q96C10 678 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 SPATA17Q96L03 361 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 CNTNAP3BQ96NU0 1288 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 HHIPQ96QV1 700 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 CNTNAP3Q9BZ76 1288 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 RXFP3Q9NSD7 469 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 DUS2Q9NX74 493 aaKnown RBP16.97■□□□□ 0.31
PDGFA-201ENST00000354513 TFIP11Q9UBB9 837 aaKnown RBP16.97■□□□□ 0.31
PDGFA-201ENST00000354513 CDH9Q9ULB4 789 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 CEP192Q8TEP8 1941 aa16.97■□□□□ 0.31
PDGFA-201ENST00000354513 CCDC163A0A0D9SF12 145 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 EPN2O95208 641 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 TNNC2P02585 160 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 CKMP06732 381 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 CHRM1P11229 460 aaPredicted RBP16.96■□□□□ 0.31
PDGFA-201ENST00000354513 BDNFP23560 247 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 SF3A2Q15428 464 aaKnown RBP16.96■□□□□ 0.31
PDGFA-201ENST00000354513 CCDC6Q16204 474 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 DUOXA2Q1HG44 320 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 FAM26FQ5R3K3 315 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 CEP68Q76N32 757 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 CPA6Q8N4T0 437 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 PLEKHO2Q8TD55 490 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 SH3RF2Q8TEC5 729 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 SCFD1Q8WVM8 642 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 ZNF516Q92618 1163 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 PCED1BQ96HM7 432 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 CGRRF1Q99675 332 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 TTLL2Q9BWV7 592 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 LINC00597Q9H2U6 94 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 DPEP3Q9H4B8 488 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 ARHGAP26Q9UNA1 814 aa16.96■□□□□ 0.31
PDGFA-201ENST00000354513 RPP40O75818 363 aaKnown RBP16.96■□□□□ 0.3
PDGFA-201ENST00000354513 OLFM2O95897 454 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 PDGFRBP09619 1106 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 DRD1P21728 446 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 OPRD1P41143 372 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 ASIC1P78348 528 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 CYP24A1Q07973 514 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 MYO1EQ12965 1108 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 PSMD6Q15008 389 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 SURF1Q15526 300 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 SNRNP35Q16560 246 aaKnown RBP16.96■□□□□ 0.3
PDGFA-201ENST00000354513 CC2D1AQ6P1N0 951 aaPredicted RBP16.96■□□□□ 0.3
PDGFA-201ENST00000354513 VSTM1Q6UX27 236 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 C4orf50Q6ZRC1 276 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 RPLP0P6Q8NHW5 317 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 CD101Q93033 1021 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 C7orf25Q9BPX7 421 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 ARRDC1-AS1Q9H2J1 176 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 CUEDC2Q9H467 287 aa16.96■□□□□ 0.3
PDGFA-201ENST00000354513 MAGEC2Q9UBF1 373 aaPredicted RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms