RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 KIF1CO43896 1103 aaKnown RBP10.08□□□□□ -0.8
RPE-201ENST00000354506 FAM155BO75949 473 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 KRT36O76013 467 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 KRT1P04264 644 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 CALB1P05937 261 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 ICAM3P32942 547 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 RFC5P40937 340 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 CTCFP49711 727 aaPredicted RBP10.08□□□□□ -0.8
RPE-201ENST00000354506 PIGHQ14442 188 aaPredicted RBP10.08□□□□□ -0.8
RPE-201ENST00000354506 MUM1Q2TAK8 710 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 ANKRD22Q5VYY1 191 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 SH2D5Q6ZV89 423 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 KIAA0319LQ8IZA0 1049 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 HIPK4Q8NE63 616 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 TMEM143Q96AN5 459 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 CLPTM1LQ96KA5 538 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 DDX56Q9NY93 547 aaKnown RBP10.08□□□□□ -0.8
RPE-201ENST00000354506 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
RPE-201ENST00000354506 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 TAP1Q03518 808 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 CXCL9Q07325 125 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 NCOA4Q13772 614 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 MSS51Q4VC12 460 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 FNBP1LQ5T0N5 605 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 OTOAQ7RTW8 1153 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 EFCAB3Q8N7B9 438 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 NETO2Q8NC67 525 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 PTPRN2Q92932 1015 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 CDHR1Q96JP9 859 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 SMC6Q96SB8 1091 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
RPE-201ENST00000354506 TXLNGQ9NUQ3 528 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 KANSL3Q9P2N6 904 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 FBXO40Q9UH90 709 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 ZNF112Q9UJU3 913 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.07□□□□□ -0.8
RPE-201ENST00000354506 TCRBV7S3A2A0A539 114 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 K7ERI5 159 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 ABLIM1O14639 778 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 PEX11AO75192 247 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 AVILO75366 819 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 F7P08709 466 aaPredicted RBP10.07□□□□□ -0.8
RPE-201ENST00000354506 UBTFL6P0CB48 400 aaPredicted RBP10.07□□□□□ -0.8
RPE-201ENST00000354506 ZCCHC18P0CG32 403 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 PTDSS1P48651 473 aaKnown RBP10.07□□□□□ -0.8
RPE-201ENST00000354506 GDF10P55107 478 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 POLE2P56282 527 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 BACE1P56817 501 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 GEMIN4P57678 1058 aaKnown RBP10.07□□□□□ -0.8
RPE-201ENST00000354506 MXRA7P84157 204 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 MTERF2Q49AM1 385 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 PCGF5Q86SE9 256 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 TTLL6Q8N841 843 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 CPT1BQ92523 772 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 ZNF75CPQ92670 426 aaPredicted RBP10.07□□□□□ -0.8
RPE-201ENST00000354506 C12orf42Q96LP6 360 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 MCEEQ96PE7 176 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 MECRQ9BV79 373 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 LNPEPQ9UIQ6 1025 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 ZFP69BQ9UJL9 534 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 LRRC42Q9Y546 428 aa10.07□□□□□ -0.8
RPE-201ENST00000354506 NDC80O14777 642 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 SMIM24O75264 130 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 TOP3BO95985 862 aaKnown RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 EGFRP00533 1210 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 LINGO3P0C6S8 592 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 AP3M2P53677 418 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ZNF280AP59817 542 aaPredicted RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 TMEM154Q6P9G4 183 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 CENPUQ71F23 418 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 NLRP9Q7RTR0 991 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ZC3H18Q86VM9 953 aaKnown RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 RHPN2Q8IUC4 686 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 EMC1Q8N766 993 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ENDOVQ8N8Q3 282 aaKnown RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 FBXO27Q8NI29 283 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ZNF398Q8TD17 642 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 SH3TC2Q8TF17 1288 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 DCAKDQ8WVC6 231 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 TFAP2BQ92481 460 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 RAB3IPQ96QF0 476 aaPredicted RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 PCYT2Q99447 389 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 SYT15Q9BQS2 421 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 MSTO1Q9BUK6 570 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 FRMD8P1Q9BZ68 369 aaPredicted RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 BATF3Q9NR55 127 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 PIH1D1Q9NWS0 290 aaKnown RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 PSMC3IPQ9P2W1 217 aaPredicted RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 C2CD2LO14523 706 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ZWINTO95229 277 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 OATP04181 439 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 IL1R2P27930 398 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 KPNB1Q14974 876 aaKnown RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 RCN1Q15293 331 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 SLC45A4Q5BKX6 768 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 PRAMEF18Q5VWM3 479 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 WDR49Q8IV35 697 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 AGGF1Q8N302 714 aaeCLIP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms