RNA–Protein interactions for RNA: ENST00000352483.3

RIPK4-202, Transcript of receptor interacting serine/threonine kinase 4, humanhuman

TSL 5 BASIC

Gene RIPK4, Length 4,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4-202ENST00000352483 BEST2Q8NFU1 509 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 ZBED3Q96IU2 234 aaPredicted RBP13.65□□□□□ -0.22
RIPK4-202ENST00000352483 RBM41Q96IZ5 413 aaKnown RBP13.65□□□□□ -0.22
RIPK4-202ENST00000352483 CXCL16Q9H2A7 254 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 PABPC3Q9H361 631 aaKnown RBP13.65□□□□□ -0.22
RIPK4-202ENST00000352483 MROH8Q9H579 483 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 CCDC160A6NGH7 325 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 B3GAT3O94766 335 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 LYPLA2O95372 231 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 MYBL1P10243 752 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 ACO1P21399 889 aaKnown RBP13.65□□□□□ -0.22
RIPK4-202ENST00000352483 THPOP40225 353 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 MSH2P43246 934 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 MAGEA4P43358 317 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 AARSP49588 968 aaKnown RBP eCLIP13.65□□□□□ -0.22
RIPK4-202ENST00000352483 GAD2Q05329 585 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 ITIH3Q06033 890 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 PDIK1LQ8N165 341 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 DEPDC1BQ8WUY9 529 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 CYTH2Q99418 400 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 CNOT10Q9H9A5 744 aaKnown RBP13.65□□□□□ -0.22
RIPK4-202ENST00000352483 SYNPO2Q9UMS6 1093 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 FIS1Q9Y3D6 152 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 FAM187AA6NFU0 413 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 TXNDC9O14530 226 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 USP12O75317 370 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 HSPA6P17066 643 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 MIPP30301 263 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 ARL2P36404 184 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 QPCTQ16769 361 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 C3orf62Q6ZUJ4 267 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 WDR49Q8IV35 697 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 TMEM176AQ96HP8 235 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 GAD1Q99259 594 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 VPS33BQ9H267 617 aa13.65□□□□□ -0.22
RIPK4-202ENST00000352483 DDX20Q9UHI6 824 aaKnown RBP13.65□□□□□ -0.22
RIPK4-202ENST00000352483 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 PECAM1P16284 738 aaPredicted RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 GNL1P36915 607 aaPredicted RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 KDM7AQ6ZMT4 941 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 ARHGEF18Q6ZSZ5 1173 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 ZDHHC14Q8IZN3 488 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.232e-7■■■■■ 52.6
RIPK4-202ENST00000352483 TINF2Q9BSI4 451 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 NACA2Q9H009 215 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 IL1RAPL1Q9NZN1 696 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 MYH9P35579 1960 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 A0A0A6YYK5 440 aaPredicted RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 LOC102724159A0A0B4J2E5 919 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 MSCO60682 206 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 SMPD1P17405 629 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 CTCFP49711 727 aaPredicted RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 PWP2Q15269 919 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 NFIL3Q16649 462 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 CLEC4CQ8WTT0 213 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 BRI3BPQ8WY22 251 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 MRPL45Q9BRJ2 306 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 SLC40A1Q9NP59 571 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 ATP9BO43861 1147 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 MT-ND3P03897 115 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 CPA2P48052 419 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 MAP3K7CLP57077 242 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 ZRSR2Q15696 482 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 MAP7D3Q8IWC1 876 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 PIWIL1Q96J94 861 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 PGLYRP2Q96PD5 576 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 DPEP3Q9H4B8 488 aa13.64□□□□□ -0.23
RIPK4-202ENST00000352483 XPO7Q9UIA9 1087 aaKnown RBP13.64□□□□□ -0.23
RIPK4-202ENST00000352483 CFAP69A5D8W1 941 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 PDHA1P08559 390 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 SPARCL1Q14515 664 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 SURF1Q15526 300 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 CFAP157Q5JU67 520 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 ZNF618Q5T7W0 954 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 CENPUQ71F23 418 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 CAVIN3Q969G5 261 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 FAM81BQ96LP2 452 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 DCLK3Q9C098 648 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 ECT2Q9H8V3 914 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 ASNSD1Q9NWL6 643 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 TSR3Q9UJK0 312 aaKnown RBP13.63□□□□□ -0.23
RIPK4-202ENST00000352483 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 HIF1AQ16665 826 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 PPP1R26Q5T8A7 1209 aaPredicted RBP13.63□□□□□ -0.23
RIPK4-202ENST00000352483 B3GNT9Q6UX72 402 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 IQCKQ8N0W5 287 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 CFAP61Q8NHU2 1237 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 FBXO41Q8TF61 875 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 PARK7Q99497 189 aaKnown RBP13.63□□□□□ -0.23
RIPK4-202ENST00000352483 L3MBTL1Q9Y468 752 aa13.63□□□□□ -0.23
RIPK4-202ENST00000352483 GOLGA8TH3BQL2 631 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms