RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 NSMFQ6X4W1 530 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 FAM196AQ6ZSG2 479 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 FBXO27Q8NI29 283 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 ABTB1Q969K4 478 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 NGLY1Q96IV0 654 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 CLPTM1LQ96KA5 538 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 LXNQ9BS40 222 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 ZNF577Q9BSK1 485 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 MRPS26Q9BYN8 205 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 TMEM117Q9H0C3 514 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 IKZF4Q9H2S9 585 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 FAIMQ9NVQ4 179 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 HSPBP1Q9NZL4 362 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 ARMCX1Q9P291 453 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 RABGEF1Q9UJ41 708 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 PRR12Q9ULL5 1215 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 STRIP2Q9ULQ0 834 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 EXOC7Q9UPT5 735 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 ADAMTSL1Q8N6G6 1762 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 ARHGAP10A1A4S6 786 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 ATP2A1O14983 1001 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 DENRO43583 198 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 CCNT2O60583 730 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 PGM3O95394 542 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 CLPTM1O96005 669 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 OATP04181 439 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 P4HBP07237 508 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 FDX1P10109 184 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 GYS1P13807 737 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 HOXA13P31271 388 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 STAT2P52630 851 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 PDIA2Q13087 525 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 EFHC1Q5JVL4 640 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 KRT39Q6A163 491 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 DRICH1Q6PGQ1 229 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 RNF111Q6ZNA4 994 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 PODNQ7Z5L7 613 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 FNDC8Q8TC99 324 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 GDPD5Q8WTR4 605 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 UNC45AQ9H3U1 944 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 TMEM8AQ9HCN3 771 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 CNTN3Q9P232 1028 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 ANAPC7Q9UJX3 599 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 SHOC2Q9UQ13 582 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 SLX4Q8IY92 1834 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 NRXN2Q9P2S2 1712 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 A0A088AWK7 358 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 C2orf71A6NGG8 1288 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 PSTPIP1O43586 416 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 ENTPD3O75355 529 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 VARSP26640 1264 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 PHBP35232 272 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 GCLMP48507 274 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 GALK1P51570 392 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 GPX6P59796 221 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 DLG4P78352 724 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 KLHL38Q2WGJ6 581 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 NADK2Q4G0N4 442 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 SLC44A4Q53GD3 710 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 SH3D19Q5HYK7 790 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 SMYD5Q6GMV2 418 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 FBXL19Q6PCT2 694 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 NCCRP1Q6ZVX7 275 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 GSTA5Q7RTV2 222 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 KSR1Q8IVT5 923 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 DDX1Q92499 740 aaKnown RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 KREMEN1Q96MU8 473 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 NT5C1BQ96P26 610 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 CCDC106Q9BWC9 280 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 YIPF2Q9BWQ6 316 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 WWP1Q9H0M0 922 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 ITGB1BP2Q9UKP3 347 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 ADAMTS6Q9UKP5 1117 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 BARX2Q9UMQ3 279 aaPredicted RBP10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 ZNF148Q9UQR1 794 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 PPME1Q9Y570 386 aa10.79□□□□□ -0.68
CHRNA1-202ENST00000348749 FAM237BA0A1B0GVD1 139 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 CYP26A1O43174 497 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 CHMP2AO43633 222 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 PEX2P28328 305 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 CPOXP36551 454 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 SCNN1DP51172 638 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 NCKAP1LP55160 1127 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 PLCB3Q01970 1234 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 GCNT1Q02742 428 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 BTG3Q14201 252 aaPredicted RBP10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 HIC1Q14526 733 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 AOC3Q16853 763 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 USP41Q3LFD5 358 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 RNASEH2BQ5TBB1 312 aaKnown RBP10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 LPCAT4Q643R3 524 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 NLRX1Q86UT6 975 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 SLC47A2Q86VL8 602 aa10.78□□□□□ -0.68
CHRNA1-202ENST00000348749 CROCCP3Q8IVE0 287 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms