RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 MTF1Q14872 753 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 GAB4Q2WGN9 574 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 FOXD4L6Q3SYB3 417 aaPredicted RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 CFAP221Q4G0U5 840 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 FOXD4L3Q6VB84 417 aaPredicted RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 EPM2AIP1Q7L775 607 aaPredicted RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 SPATA2LQ8IUW3 424 aaPredicted RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 TMEM86AQ8N2M4 240 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 GPR161Q8N6U8 529 aaKnown RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 SH3RF2Q8TEC5 729 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 NUP210Q8TEM1 1887 aaPredicted RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 CACTINQ8WUQ7 758 aaKnown RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 ZNF516Q92618 1163 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 DHX58Q96C10 678 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 TRMT2BQ96GJ1 504 aaKnown RBP11.73□□□□□ -0.53
UBE2A-201ENST00000346330 HHIPQ96QV1 700 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 DPEP3Q9H4B8 488 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 ECT2Q9H8V3 914 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 AGPAT3Q9NRZ7 376 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 HSPBP1Q9NZL4 362 aa11.73□□□□□ -0.53
UBE2A-201ENST00000346330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.72□□□□□ -0.53
UBE2A-201ENST00000346330 DCLK1O15075 740 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 CLIC2O15247 247 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 LDHAP00338 332 aaKnown RBP11.72□□□□□ -0.53
UBE2A-201ENST00000346330 CKMP06732 381 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 DDX6P26196 483 aaKnown RBP eCLIP11.72□□□□□ -0.53
UBE2A-201ENST00000346330 LHX1P48742 406 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
UBE2A-201ENST00000346330 FAM160A1Q05DH4 1040 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 GRSF1Q12849 480 aaKnown RBP eCLIP11.72□□□□□ -0.53
UBE2A-201ENST00000346330 ALCAMQ13740 583 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 ZNF268Q14587 947 aaPredicted RBP11.72□□□□□ -0.53
UBE2A-201ENST00000346330 CSRP2Q16527 193 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 EML3Q32P44 896 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 CEP68Q76N32 757 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 TRAPPC11Q7Z392 1133 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 NELFCDQ8IXH7 590 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 CCDC65Q8IXS2 484 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 SYNPOQ8N3V7 929 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 PLEKHO2Q8TD55 490 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 OSCP1Q8WVF1 389 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 SCFD1Q8WVM8 642 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 PCED1BQ96HM7 432 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 INTS4Q96HW7 963 aaKnown RBP11.72□□□□□ -0.53
UBE2A-201ENST00000346330 P2RY13Q9BPV8 354 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 RTKNQ9BST9 563 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 RNF38Q9H0F5 515 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 BLZF1Q9H2G9 400 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 ARRDC1-AS1Q9H2J1 176 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 TMEM206Q9H813 350 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 KIF9Q9HAQ2 790 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 ZZEF1O43149 2961 aa11.72□□□□□ -0.53
UBE2A-201ENST00000346330 CHD6Q8TD26 2715 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 TRAV19A0A0A6YYK7 116 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 ZNF233A6NK53 670 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CLDN5O00501 218 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 SLC30A4O14863 429 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 SPTLC2O15270 562 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 RPP40O75818 363 aaKnown RBP11.71□□□□□ -0.53
UBE2A-201ENST00000346330 DLATP10515 647 aaKnown RBP11.71□□□□□ -0.53
UBE2A-201ENST00000346330 PCSK1P29120 753 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CNR2P34972 360 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 MAGEA11P43364 429 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CASP4P49662 377 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CYP2J2P51589 502 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 ASIC1P78348 528 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 EHHADHQ08426 723 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 PDGFRLQ15198 375 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 STK38Q15208 465 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 SNRNP35Q16560 246 aaKnown RBP11.71□□□□□ -0.53
UBE2A-201ENST00000346330 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 TCEAL6Q6IPX3 200 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CC2D1AQ6P1N0 951 aaPredicted RBP11.71□□□□□ -0.53
UBE2A-201ENST00000346330 GRAMD1CQ8IYS0 662 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 RPLP0P6Q8NHW5 317 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 GAB3Q8WWW8 586 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 TCEAL3Q969E4 200 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 CCDC127Q96BQ5 260 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 FUBP3Q96I24 572 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBE2A-201ENST00000346330 ANKRD36BP1Q96IX9 119 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 ZNF518BQ9C0D4 1074 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 TNMDQ9H2S6 317 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 DUS2Q9NX74 493 aaKnown RBP11.71□□□□□ -0.53
UBE2A-201ENST00000346330 INVSQ9Y283 1065 aa11.71□□□□□ -0.53
UBE2A-201ENST00000346330 OBSL1O75147 1896 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 SDK1Q7Z5N4 2213 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 F8VP50 259 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 K7ELQ4 463 aaPredicted RBP11.7□□□□□ -0.54
UBE2A-201ENST00000346330 LRP3O75074 770 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 TNNC2P02585 160 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 CHRM1P11229 460 aaPredicted RBP11.7□□□□□ -0.54
UBE2A-201ENST00000346330 HNRNPLP14866 589 aaKnown RBP eCLIP11.7□□□□□ -0.544e-7■□□□□ 9.6
UBE2A-201ENST00000346330 HDCP19113 662 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 WARSP23381 471 aaKnown RBP11.7□□□□□ -0.54
UBE2A-201ENST00000346330 OPRD1P41143 372 aa11.7□□□□□ -0.54
UBE2A-201ENST00000346330 RAP1GAPP47736 663 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms