RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ERVV-1B6SEH8 477 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 ZNF862O60290 1169 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 PSMB9P28065 219 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 WASHC5Q12768 1159 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 BMPR2Q13873 1038 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-202ENST00000345356 ARHGEF38Q9NXL2 777 aa12.56□□□□□ -0.4
COL12A1-202ENST00000345356 RSL24D1Q9UHA3 163 aaKnown RBP12.56□□□□□ -0.4
COL12A1-202ENST00000345356 HBS1LQ9Y450 684 aaKnown RBP12.56□□□□□ -0.4
COL12A1-202ENST00000345356 F8W8V4 182 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 RPA3P35244 121 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 PARP6Q2NL67 630 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 RIPOR1Q6ZS17 1223 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 C6orf62Q9GZU0 229 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 TBC1D22BQ9NU19 505 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 SUGT1Q9Y2Z0 365 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 RTN3O95197 1032 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 JAK1P23458 1154 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 SKIV2L2P42285 1042 aaKnown RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 GSCP56915 257 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 MRPS22P82650 360 aaKnown RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 GRB10Q13322 594 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 CCNG2Q16589 344 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 NRF1Q16656 503 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 SGSM1Q2NKQ1 1148 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 PLEKHM3Q6ZWE6 761 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 KDELC2Q7Z4H8 507 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 NT5DC3Q86UY8 548 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 SEMA6AQ9H2E6 1030 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 WDR35Q9P2L0 1181 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 RPL26L1Q9UNX3 145 aaKnown RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 EIF3DO15371 548 aaKnown RBP eCLIP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 MAPK6Q16659 721 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 ZNF568Q3ZCX4 644 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 CCDC149Q6ZUS6 474 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 NCAPG2Q86XI2 1143 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 KBTBD2Q8IY47 623 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 PHF21AQ96BD5 680 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 ZNF669Q96BR6 464 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 HEATR9A2RTY3 570 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 RCCD1A6NED2 376 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 PDZK1P1A8MUH7 402 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 APOA4P06727 396 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 FASP25445 335 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 RRP1BQ14684 758 aaKnown RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 EPHA7Q15375 998 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 IQCKQ8N0W5 287 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 STX19Q8N4C7 294 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 TMEM121Q9BTD3 319 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 SELENONQ9NZV5 590 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 IPPQ9Y573 584 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 NRKQ7Z2Y5 1582 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 H2AFYO75367 372 aaKnown RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 UPP2O95045 317 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 NPTXRO95502 500 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 FESP07332 822 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 ALOX12P18054 663 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 MMRN1Q13201 1228 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 TDRD5Q8NAT2 981 aaKnown RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 SLC5A5Q92911 643 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 TSPAN17Q96FV3 270 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 APOPT1Q96IL0 206 aa12.55□□□□□ -0.4
COL12A1-202ENST00000345356 POLR3FQ9H1D9 316 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-202ENST00000345356 KANSL1LA0AUZ9 987 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 CHRNB3Q05901 458 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 DGUOKQ16854 277 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 TTC27Q6P3X3 843 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 ZSCAN18Q8TBC5 510 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-202ENST00000345356 TRPC7Q9HCX4 862 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 MGRN1O60291 552 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 PYGLP06737 847 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 FCGR1AP12314 374 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 GTF2H3Q13889 308 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 FAM160B2Q86V87 743 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 CDRT15Q96T59 188 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 NRDE2Q9H7Z3 1164 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 TCF7L2Q9NQB0 619 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 C3orf70A6NLC5 250 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-202ENST00000345356 STIP1P31948 543 aaKnown RBP12.54□□□□□ -0.4
COL12A1-202ENST00000345356 BLVRAP53004 296 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 C2CD6Q53TS8 623 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 ZNF677Q86XU0 584 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 FAM13CQ8NE31 585 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-202ENST00000345356 PCDHGC5Q9Y5F6 944 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 ABCC3O15438 1527 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 RARAP10276 462 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 ALADP13716 330 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 ATP6V1B2P21281 511 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 ME2P23368 584 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 SLC1A6P48664 564 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 USP4Q13107 963 aa12.54□□□□□ -0.4
COL12A1-202ENST00000345356 BFSP2Q13515 415 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms