RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 CATSPERBQ9H7T0 1116 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 DDX18Q9NVP1 670 aaKnown RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 BGNP21810 368 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 CASP4P49662 377 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 AQP5P55064 265 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 EMC2Q15006 297 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 SGMS1Q86VZ5 419 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 APOL2Q9BQE5 337 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 NAGPAQ9UK23 515 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 ZNF609O15014 1411 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 PIPSLA2A3N6 862 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 DNALI1O14645 258 aaPredicted RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 OR1G1P47890 313 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 LAMB3Q13751 1172 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 KLHDC7AQ5VTJ3 777 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 DENND1BQ6P3S1 775 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 RIBC1Q8N443 379 aaPredicted RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 RPS6KL1Q9Y6S9 549 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 HEATR9A2RTY3 570 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 SAC3D1A6NKF1 404 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 ITGB3P05106 788 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 CSNK2BP67870 215 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 PTK6Q13882 451 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 C10orf120Q5SQS8 335 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 TADA1Q96BN2 335 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 MAGEB18Q96M61 343 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 VCPKMTQ9H867 229 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 SYBUQ9NX95 663 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 TRMT6Q9UJA5 497 aaKnown RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 VWA5AO00534 786 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 CDC25CP30307 473 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 NFYCQ13952 458 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 COL23A1Q86Y22 540 aaPredicted RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
SEMA6A-202ENST00000343348 EIF2B2P49770 351 aaKnown RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 PSMD7P51665 324 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ERVK-24P63145 666 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 PRKCEQ02156 737 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 RASA2Q15283 850 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ALX1Q15699 326 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 KCTD21Q4G0X4 260 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 KDM7AQ6ZMT4 941 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 C19orf18Q8NEA5 215 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 DIABLOQ9NR28 239 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ATP6V1HQ9UI12 483 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 CRLS1Q9UJA2 301 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SAMD9Q5K651 1589 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 C1orf232A0A0U1RR37 186 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 FAM25AB3EWG3 89 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 FAM25CB3EWG5 89 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 FAM25GB3EWG6 89 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 CLPTM1O96005 669 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 MMRN1Q13201 1228 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SETD3Q86TU7 594 aaPredicted RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 RDM1Q8NG50 284 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 TMEM8AQ9HCN3 771 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 CNGB3Q9NQW8 809 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 LSM7Q9UK45 103 aaKnown RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SH3BP1Q9Y3L3 701 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 AP4S1Q9Y587 144 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 TMEM94Q12767 1356 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 KDM6BO15054 1643 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 UBOX5O94941 541 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 TMEM253P0C7T8 217 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 PCNAP12004 261 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ALOX15P16050 662 aaPredicted RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 CENPCQ03188 943 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 GLRA4Q5JXX5 417 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 EFCAB12Q6NXP0 572 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ERAP2Q6P179 960 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 KRT78Q8N1N4 520 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 MMGT1Q8N4V1 131 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 MIEF2Q96C03 454 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SPATA16Q9BXB7 569 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 CYLDQ9NQC7 956 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 GPRC5DQ9NZD1 345 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 COL15A1P39059 1388 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 NPTXRO95502 500 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 C16orf72Q14CZ0 275 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SHROOM1Q2M3G4 852 aaPredicted RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ARMCX4Q5H9R4 360 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 MFSD14CQ5VZR4 134 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ACAD10Q6JQN1 1059 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 UTS2BQ765I0 119 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SCFD2Q8WU76 684 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 KRT35Q92764 455 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 ZNF333Q96JL9 665 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 CATSPER2Q96P56 530 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 SEPHS2Q99611 448 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 PAPOLBQ9NRJ5 636 aaKnown RBP12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 GPATCH2LQ9NWQ4 482 aa12.59□□□□□ -0.39
SEMA6A-202ENST00000343348 EIF3LQ9Y262 564 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms