RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 IRF5Q13568 498 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 KIAA0319Q5VV43 1072 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 LCLAT1Q6UWP7 414 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 CTU1Q7Z7A3 348 aaKnown RBP7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 SERINC5Q86VE9 423 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 KATNAL2Q8IYT4 538 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 UBLCP1Q8WVY7 318 aaPredicted RBP7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 RUBCNQ92622 972 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 PEBP4Q96S96 227 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 SENP6Q9GZR1 1112 aaPredicted RBP7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 EPB41L4BQ9H329 900 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 PCDH10Q9P2E7 1040 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 DNPEPQ9ULA0 475 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 UBQLN1Q9UMX0 589 aaKnown RBP7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 NFS1Q9Y697 457 aa7.8□□□□□ -1.16
SRFBP1-201ENST00000339397 PAPSS1O43252 624 aaPredicted RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 PSTPIP1O43586 416 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 KRT1P04264 644 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 SHBGP04278 402 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 IVDP26440 423 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 MIPP30301 263 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 HSPA9P38646 679 aaKnown RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 CLCNKBP51801 687 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 PTGISQ16647 500 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 PKDCCQ504Y2 493 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 XKR4Q5GH76 650 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 CFAP58Q5T655 872 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 WSCD1Q658N2 575 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 TAF2Q6P1X5 1199 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 AGMOQ6ZNB7 445 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 NT5DC4Q86YG4 428 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 CD302Q8IX05 232 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 NME8Q8N427 588 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 SMC1BQ8NDV3 1235 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 FAM71BQ8TC56 605 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 SLC35F5Q8WV83 523 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 HSPH1Q92598 858 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 MCRS1Q96EZ8 462 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 CCDC114Q96M63 670 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 FMO2Q99518 471 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 CENPHQ9H3R5 247 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 SEMA4AQ9H3S1 761 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 FAM105AQ9NUU6 356 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 MTUS1Q9ULD2 1270 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 PADI3Q9ULW8 664 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 RANBP2P49792 3224 aaKnown RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 CASTOR2A6NHX0 329 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 DCDC2CA8MYV0 355 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 MAP3K6O95382 1288 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 POMCP01189 267 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 KCNE1P15382 129 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 AXLP30530 894 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 GABRB2P47870 512 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 SCNN1GP51170 649 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 DHX34Q14147 1143 aaKnown RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 PIGHQ14442 188 aaPredicted RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 PPP1R7Q15435 360 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 DEFB115Q30KQ5 88 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 CYP4V2Q6ZWL3 525 aaPredicted RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 TAB3Q8N5C8 712 aaPredicted RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 KLHDC9Q8NEP7 349 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 EXD1Q8NHP7 514 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 SLC2A14Q8TDB8 520 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 HASPINQ8TF76 798 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 RXFP2Q8WXD0 754 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 PPP1R10Q96QC0 940 aaKnown RBP7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 SH3GL2Q99962 352 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 TRPV6Q9H1D0 765 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 GPATCH2LQ9NWQ4 482 aa7.79□□□□□ -1.16
SRFBP1-201ENST00000339397 ERICH4A6NGS2 130 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 ARL5CA6NH57 179 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 HSF2BPO75031 334 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 ECEL1O95672 775 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 STAU1O95793 577 aaKnown RBP7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 LCP1P13796 627 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 PDGFRAP16234 1089 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 CHKAP35790 457 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 CDKN2BP42772 138 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 GPS2Q13227 327 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 NOGQ13253 232 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 ZNF268Q14587 947 aaPredicted RBP7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 CEP85LQ5SZL2 805 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 SPOCD1Q6ZMY3 1216 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 CCDC25Q86WR0 208 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 LRRC52Q8N7C0 313 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 TMEM121Q9BTD3 319 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 RAB17Q9H0T7 212 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 UPF3AQ9H1J1 476 aaKnown RBP7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 RABEP2Q9H5N1 569 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 SPC25Q9HBM1 224 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 MED4Q9NPJ6 270 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 AAASQ9NRG9 546 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 TMEM30AQ9NV96 361 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 CALCOCO1Q9P1Z2 691 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 DERAQ9Y315 318 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 FAM187AA6NFU0 413 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 C2CD4BA6NLJ0 364 aa7.78□□□□□ -1.16
SRFBP1-201ENST00000339397 MAN1A1P33908 653 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms