RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 FAM200BP0CF97 657 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 SSTR3P32745 418 aaPredicted RBP23.49■■□□□ 1.35
SDC3-202ENST00000339394 MAGEA11P43364 429 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 ARID5BQ14865 1188 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 ASIC2Q16515 512 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 GOLGA7BQ2TAP0 167 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 TTC30AQ86WT1 665 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 CNGA4Q8IV77 575 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 ANKRD52Q8NB46 1076 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 DNAJC7Q99615 494 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 KRT82Q9NSB4 513 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 ABHD10Q9NUJ1 306 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 DPP7Q9UHL4 492 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 NOCTQ9UK39 431 aaKnown RBP23.49■■□□□ 1.35
SDC3-202ENST00000339394 ATP8B3O60423 1300 aa23.49■■□□□ 1.35
SDC3-202ENST00000339394 LINC01565O15544 149 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 BEST1O76090 585 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 MICAL2O94851 1124 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 GLP2RO95838 553 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 C8AP07357 584 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 GRIK1P39086 918 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 LIN9Q5TKA1 542 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 TAF3Q5VWG9 929 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 TMEM184AQ6ZMB5 413 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 CCDC149Q6ZUS6 474 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 HDAC7Q8WUI4 952 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 SLC20A1Q8WUM9 679 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 KCNK16Q96T55 309 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 DUSP16Q9BY84 665 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 HESX1Q9UBX0 185 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 INSL5Q9Y5Q6 135 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 NPR3P17342 541 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 HNRNPH3P31942 346 aaKnown RBP23.48■■□□□ 1.35
SDC3-202ENST00000339394 ADAM15Q13444 863 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 DDR2Q16832 855 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 CLEC20AQ6ZU45 233 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 ZNF677Q86XU0 584 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 SCN4BQ8IWT1 228 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 TC2NQ8N9U0 490 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 UBA3Q8TBC4 463 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 SMOQ99835 787 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 CSNK1G1Q9HCP0 422 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 IMPACTQ9P2X3 320 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 PCDHGC3Q9UN70 934 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 YIPF1Q9Y548 306 aa23.48■■□□□ 1.35
SDC3-202ENST00000339394 ATG2AQ2TAZ0 1938 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 F8VP50 259 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 M0QYV0 167 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 SKILP12757 684 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 PRKCIP41743 596 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 GPR15P49685 360 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 MAP3K7CLP57077 242 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 CDR2Q01850 454 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 KLHL30Q0D2K2 578 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 CTC1Q2NKJ3 1217 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 PKDCCQ504Y2 493 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 HGSNATQ68CP4 663 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 RTL10Q7L3V2 364 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 ZMIZ2Q8NF64 920 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 CASP10Q92851 521 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 HAUS4Q9H6D7 363 aa23.47■■□□□ 1.35
SDC3-202ENST00000339394 DMAP1Q9NPF5 467 aaPredicted RBP23.47■■□□□ 1.35
SDC3-202ENST00000339394 NCK2O43639 380 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 RFPL2O75678 378 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 MMEP08473 750 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 ALDH1A3P47895 512 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 BCAT1P54687 386 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 TWF1Q12792 350 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 CCDC85BQ15834 202 aaPredicted RBP23.46■■□□□ 1.35
SDC3-202ENST00000339394 TSR1Q2NL82 804 aaKnown RBP23.46■■□□□ 1.35
SDC3-202ENST00000339394 SDHAF4Q5VUM1 108 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 ELMSAN1Q6PJG2 1045 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 WDR59Q6PJI9 974 aa23.46■■□□□ 1.35
SDC3-202ENST00000339394 TRIM66O15016 1216 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 ZMYND10O75800 440 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 SERPING1P05155 500 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 CHRNB2P17787 502 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 ATF6P18850 670 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 SLC8A3P57103 927 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 RPL10AP62906 217 aaKnown RBP23.45■■□□□ 1.34
SDC3-202ENST00000339394 PDE4CQ08493 712 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 BST2Q10589 180 aaKnown RBP23.45■■□□□ 1.34
SDC3-202ENST00000339394 COL19A1Q14993 1142 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 MEA1Q16626 185 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 PPM1LQ5SGD2 360 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 DENND1BQ6P3S1 775 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 PASD1Q8IV76 773 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 GPR152Q8TDT2 470 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 ANP32BQ92688 251 aaKnown RBP23.45■■□□□ 1.34
SDC3-202ENST00000339394 C8orf48Q96LL4 319 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 PDCL3Q9H2J4 239 aa23.45■■□□□ 1.34
SDC3-202ENST00000339394 TULP2O00295 520 aa23.44■■□□□ 1.34
SDC3-202ENST00000339394 GPD2P43304 727 aa23.44■■□□□ 1.34
SDC3-202ENST00000339394 FMO1Q01740 532 aa23.44■■□□□ 1.34
SDC3-202ENST00000339394 ZNF571Q7Z3V5 609 aaPredicted RBP23.44■■□□□ 1.34
SDC3-202ENST00000339394 SLC35F5Q8WV83 523 aa23.44■■□□□ 1.34
SDC3-202ENST00000339394 SECISBP2LQ93073 1101 aaKnown RBP23.44■■□□□ 1.34
SDC3-202ENST00000339394 AGPAT1Q99943 283 aa23.44■■□□□ 1.34
SDC3-202ENST00000339394 SYT11Q9BT88 431 aa23.44■■□□□ 1.34
SDC3-202ENST00000339394 LHX5Q9H2C1 402 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms