RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 MPLP40238 635 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 KCNA1Q09470 495 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 DMC1Q14565 340 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 PLK5Q496M5 336 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 RNF43Q68DV7 783 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 FAM171BQ6P995 826 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 ARL14EPQ8N8R7 260 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-202ENST00000338995 SH3RF2Q8TEC5 729 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 DNAJC19Q96DA6 116 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 CHFRQ96EP1 664 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 HPDLQ96IR7 371 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 SPATA17Q96L03 361 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 HHIPQ96QV1 700 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 PCIF1Q9H4Z3 704 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 FBRSL1Q9HCM7 1045 aaKnown RBP15.22■□□□□ 0.03
COMMD4-202ENST00000338995 PDE11AQ9HCR9 933 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 ANK1P16157 1881 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 DNAH14Q0VDD8 3507 aa15.22■□□□□ 0.03
COMMD4-202ENST00000338995 SPAG17Q6Q759 2223 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 SLC9A3R1O14745 358 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-202ENST00000338995 CAVIN2O95810 425 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 TCF3P15923 654 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 GBP1P32455 592 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 DGKEP52429 567 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 CREB5Q02930 508 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 ZNF77Q15935 545 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 CCDC6Q16204 474 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 EML3Q32P44 896 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 PLA2G2CQ5R387 149 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 N4BP2L1Q5TBK1 243 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-202ENST00000338995 DAB2IPQ5VWQ8 1189 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 KIAA1958Q8N8K9 716 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 TSTD1Q8NFU3 115 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 LSM14BQ9BX40 385 aaKnown RBP15.21■□□□□ 0.03
COMMD4-202ENST00000338995 PANK2Q9BZ23 570 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 IKZF4Q9H2S9 585 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 INTS13Q9NVM9 706 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 FBXO2Q9UK22 296 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-202ENST00000338995 ARHGAP26Q9UNA1 814 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 WNT6Q9Y6F9 365 aa15.21■□□□□ 0.03
COMMD4-202ENST00000338995 CNOT1A5YKK6 2376 aaKnown RBP15.2■□□□□ 0.02
COMMD4-202ENST00000338995 TM4SF5O14894 197 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 TRIM66O15016 1216 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 ALDH1A2O94788 518 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 PRPF6O94906 941 aaKnown RBP15.2■□□□□ 0.02
COMMD4-202ENST00000338995 CD2BP2O95400 341 aaKnown RBP15.2■□□□□ 0.02
COMMD4-202ENST00000338995 FAM163BP0C2L3 166 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 AMPD3Q01432 767 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 CYP27A1Q02318 531 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 CEBPZQ03701 1054 aaKnown RBP15.2■□□□□ 0.02
COMMD4-202ENST00000338995 SOWAHAQ2M3V2 549 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 DENND5BQ6ZUT9 1274 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 MMS19Q96T76 1030 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 PKMYT1Q99640 499 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 SYT15Q9BQS2 421 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 CBWD1Q9BRT8 395 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 DUSP15Q9H1R2 295 aaPredicted RBP15.2■□□□□ 0.02
COMMD4-202ENST00000338995 SNX25Q9H3E2 840 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 GCNT4Q9P109 453 aa15.2■□□□□ 0.02
COMMD4-202ENST00000338995 KIF26AQ9ULI4 1882 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-202ENST00000338995 PDGFRBP09619 1106 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 BDNFP23560 247 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 HOXC13P31276 330 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 GNL1P36915 607 aaPredicted RBP15.19■□□□□ 0.02
COMMD4-202ENST00000338995 USP4Q13107 963 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 TDRD10Q5VZ19 366 aaKnown RBP15.19■□□□□ 0.02
COMMD4-202ENST00000338995 OSTM1Q86WC4 334 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 STKLD1Q8NE28 680 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 ZSWIM2Q8NEG5 633 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 CLIC6Q96NY7 704 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 SLC22A12Q96S37 553 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 LINC00597Q9H2U6 94 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 SIX4Q9UIU6 781 aa15.19■□□□□ 0.02
COMMD4-202ENST00000338995 GREB1Q4ZG55 1949 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 DENND4CQ5VZ89 1909 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 FRMD3A2A2Y4 597 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 BCLAF3A2AJT9 711 aaKnown RBP15.18■□□□□ 0.02
COMMD4-202ENST00000338995 C2orf78A6NCI8 922 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 KHNYNO15037 678 aaKnown RBP15.18■□□□□ 0.02
COMMD4-202ENST00000338995 ATP2C2O75185 946 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 TADA3O75528 432 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 KCNK5O95279 499 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 ABL1P00519 1130 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 WARSP23381 471 aaKnown RBP15.18■□□□□ 0.02
COMMD4-202ENST00000338995 CASP5P51878 434 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 WNT7BP56706 349 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 MRPS21P82921 87 aaKnown RBP15.18■□□□□ 0.02
COMMD4-202ENST00000338995 SHC2P98077 582 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 BYSLQ13895 437 aaKnown RBP15.18■□□□□ 0.02
COMMD4-202ENST00000338995 C2orf27AQ580R0 203 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 HS2ST1Q7LGA3 356 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 DDX42Q86XP3 938 aaKnown RBP eCLIP15.18■□□□□ 0.02
COMMD4-202ENST00000338995 WDR49Q8IV35 697 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 CXorf38Q8TB03 319 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 RIN3Q8TB24 985 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 MYCBPAPQ8TBZ2 947 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
COMMD4-202ENST00000338995 FNBP1Q96RU3 617 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms